Strain identifier

BacDive ID: 654

Type strain: Yes

Species: Heyndrickxia coagulans

Strain Designation: 609, NRS-609

Strain history: CIP <- 1966, ATCC <- N.R. Smith: strain NRS-609 <- 1937, J. Porter <- B. Hammer

NCBI tax ID(s): 1398 (species)

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General

@ref: 2009

BacDive-ID: 654

DSM-Number: 1

keywords: genome sequence, 16S sequence, Bacteria, aerobe, spore-forming, lactate production, human pathogen

description: Heyndrickxia coagulans 609 is an aerobe, spore-forming human pathogen that produces lactate and was isolated from evaporated milk.

NCBI tax id

  • NCBI tax id: 1398
  • Matching level: species

strain history

@refhistory
2009<- ATCC <- N.R. Smith, 609 <- J. Porter <- B. Hammer
67770IAM 1115 <-- ATCC 7050 <-- N. R. Smith 609 <-- J. R. Porter <-- B. W. Hammer.
118318CIP <- 1966, ATCC <- N.R. Smith: strain NRS-609 <- 1937, J. Porter <- B. Hammer

doi: 10.13145/bacdive654.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Heyndrickxia
  • species: Heyndrickxia coagulans
  • full scientific name: Heyndrickxia coagulans (Hammer 1915) Narsing Rao et al. 2023

  • synonyms

    @refsynonym
    20215Bacillus coagulans
    20215Weizmannia coagulans

@ref: 2009

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Weizmannia

species: Weizmannia coagulans

full scientific name: Weizmannia coagulans (Hammer 1915) Gupta et al. 2020

strain designation: 609, NRS-609

type strain: yes

Morphology

cell morphology

@refcell lengthmotilityconfidencegram staincell shape
228935.5-6 µm
69480yes93.771
69480100positive
118318yespositiverod-shaped

colony morphology

@refcolony color
22893white
118318

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41798MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
2009NUTRIENT AGAR (DSMZ Medium 1)yesName: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/1
2009STANDARD I MEDIUM (DSMZ Medium 453)yesName: STANDARD I MEDIUM (DSMZ Medium 453) Composition: Casein peptone 7.8 g/l Meat peptone 7.8 g/l NaCl 5.6 g/l Yeast extract 2.8 g/l D(+)-Glucose 1.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/453
118318CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
118318CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
22893positivegrowth30-55
22894positivemaximum60thermophilic
2009positivegrowth40thermophilic
41798positivegrowth37mesophilic
44986positivegrowth37mesophilic
67770positivegrowth37mesophilic
118318positivegrowth22-55
118318nogrowth10psychrophilic

culture pH

  • @ref: 118318
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
44986aerobe
44986anaerobe
118318facultative anaerobe

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 100

compound production

@refcompound
2009inhibitors for glycoside hydrolases
2009L(+) lactic acid
2009oligo-1,6 glucosidase
22893Lactic acid
22893Acetoin
22894Acetoin
20216Inhibitors for glycoside hydrolases

halophily

@refsaltgrowthtested relationconcentration
118318NaClpositivegrowth0-6 %
118318NaClnogrowth8 %
118318NaClnogrowth10 %

observation

  • @ref: 67770
  • observation: quinones: MK-7

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2289362318D-lyxose-builds acid from
2289316443D-tagatose-builds acid from
2289365327D-xylose-builds acid from
228934853esculin+builds acid from
2289328757fructose+builds acid from
2289328260galactose+builds acid from
2289324265gluconate+builds acid from
2289317234glucose+builds acid from
228935291gelatin-hydrolysis
2289317754glycerol+builds acid from
2289330849L-arabinose-builds acid from
2289317716lactose+builds acid from
2289329864mannitol-builds acid from
2289337684mannose+builds acid from
2289337657methyl D-glucoside-builds acid from
22893506227N-acetyl-D-glucosamine+builds acid from
2289326546rhamnose-builds acid from
2289333942ribose-builds acid from
2289317814salicin+/-builds acid from
2289328017starch+/-builds acid from
2289317992sucrose-builds acid from
2289327082trehalose+builds acid from
2289332528turanose+builds acid from
2289317234glucose+fermentation
22894168082-dehydro-D-gluconate-growth
22894581435-dehydro-D-gluconate-growth
2289415963ribitol-growth
22894casein-hydrolysis
2289416947citrate-growth
2289415824D-fructose+growth
2289428847D-fucose-growth
2289412936D-galactose+growth
2289412936D-galactose+fermentation
2289417634D-glucose+growth
2289462318D-lyxose-growth
2289416024D-mannose+growth
2289416024D-mannose+fermentation
2289416443D-tagatose-growth
2289416813galactitol-growth
228945291gelatin-hydrolysis
2289417754glycerol+growth
2289428087glycogen-growth
2289415443inulin-growth
2289418403L-arabitol-growth
2289418287L-fucose-growth
2289417266L-sorbose-growth
2289465328L-xylose-growth
2289417716lactose+fermentation
2289417306maltose+growth
2289417306maltose+fermentation
2289429864mannitol-growth
228946731melezitose-growth
2289428053melibiose+growth
2289428053melibiose+fermentation
2289443943methyl alpha-D-mannoside-growth
2289474863methyl beta-D-xylopyranoside-growth
22894506227N-acetyl-D-glucosamine+growth
2289417272propionate-growth
2289428017starch+hydrolysis
2289428017starch+fermentation
2289417992sucrose+fermentation
2289427082trehalose+growth
2289417151xylitol-growth
2289417632nitrate-reduction
11831816947citrate-carbon source
1183184853esculin+hydrolysis
118318606565hippurate-hydrolysis
11831817632nitrate-reduction
11831816301nitrite-reduction
11831817632nitrate+respiration
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

metabolite production

@refChebi-IDmetaboliteproduction
2289324996lactateyes
2289315688acetoinyes
2289416136hydrogen sulfideno
2289435581indoleno
2289415688acetoinyes
11831835581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
2289315688acetoin+
2289317234glucose+
2289415688acetoin+
11831815688acetoin+
11831817234glucose+

enzymes

@refvalueactivityec
22893beta-galactosidase+3.2.1.23
22893gelatinase-
22894arginine dihydrolase-3.5.3.6
22894gelatinase-
22894lysine decarboxylase-4.1.1.18
22894ornithine decarboxylase-4.1.1.17
22894tryptophan deaminase-4.1.99.1
22894urease-3.5.1.5
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase+3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase+3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
118318oxidase-
118318beta-galactosidase+3.2.1.23
118318alcohol dehydrogenase-1.1.1.1
118318gelatinase-
118318amylase-
118318DNase-
118318caseinase+3.4.21.50
118318catalase+1.11.1.6
118318tween esterase+
118318gamma-glutamyltransferase-2.3.2.2
118318lecithinase-
118318lipase-
118318lysine decarboxylase-4.1.1.18
118318ornithine decarboxylase-4.1.1.17
118318urease-3.5.1.5

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlRIBXYLMANMALLACSACGLYGCAT
44986-+---+---------+-+-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
118318-+++-+----++++++----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
118318---------++--------------------+-------------------------------------------------------------------

Isolation, sampling and environmental information

isolation

@refsample type
2009evaporated milk
44986Milk,evaporated
67770Evaporated milk
118318Food, Milk powder

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Food production
  • Cat3: #Dairy product

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
2009yes, in single cases1Risk group (German classification)
1183181Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Bacillus coagulans clone Bcoa2 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF478062507ena1121088
20218Planctomycete DSM1A9 16S ribosomal RNA gene, partial sequenceJF4437511381ena1027568
20218Ferrimonas sp. DSM1 16S ribosomal RNA gene, partial sequenceKC439167900ena1343210
2009Bacillus coagulans strain ATCC 7050 16S ribosomal RNA gene, partial sequenceDQ2979281549ena1121088
67770Bacillus coagulans gene for 16S rRNA, partial sequenceAB2717521479ena1398
67770Bacillus coagulans gene for 16S rRNA, partial sequence, strain: IAM 12463D162671481ena1398
67770B.coagulans 16S ribosomal RNAX606141429ena1398

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Heyndrickxia coagulans DSM 1 = ATCC 7050GCA_000832905completencbi1121088
66792Bacillus coagulans DSM 1 = ATCC 70501121088.10completepatric1121088
66792Bacillus coagulans DSM 1 = ATCC 70501121088.3wgspatric1121088
66792Bacillus coagulans DSM 1 = ATCC 70501121088.13wgspatric1121088
66792Bacillus coagulans DSM 1 = ATCC 70501121088.9wgspatric1121088
66792Bacillus coagulans ATCC 70502524614861draftimg1121088
66792Bacillus coagulans DSM 1 = ATCC 70502630968645completeimg1121088
67770Heyndrickxia coagulans DSM 1 = ATCC 7050GCA_000290615contigncbi1121088
67770Heyndrickxia coagulans DSM 1 = ATCC 7050GCA_000420205contigncbi1121088
67770Heyndrickxia coagulans DSM 1 = ATCC 7050GCA_900128875scaffoldncbi1121088

GC content

@refGC-contentmethod
200947.1thermal denaturation, midpoint method (Tm)
200944.5Buoyant density centrifugation (BD)
6777046.6thermal denaturation, midpoint method (Tm)
6777044.9Buoyant density centrifugation (BD)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes86no
motileyes88.262no
flagellatedyes83.333no
gram-positiveyes84.592no
anaerobicno97.81no
aerobicyes65.855no
halophileyes61.764no
spore-formingyes93.321no
glucose-utilyes91.766yes
thermophileno66.302no
glucose-fermentno60.671yes

External links

@ref: 2009

culture collection no.: DSM 1, CCM 2013, NCIB 9365, NCTC 10334, WDCM 00002, CCUG 7417, ATCC 7050, IAM 1115, NRS 609, JCM 2257, BCRC 10606, CECT 12, CFBP 4225, CIP 66.25, CN 2202, HAMBI 1931, IAM 12463, IFO 12583, IMET 10993, KCTC 3625, LMG 6326, NBRC 12583, NCCB 77025, NCFB 1761, NCIMB 9365, NRIC 1005, NRRL NRS-609, VKM B-497, VTT E-98150, NCDO 1761

straininfo link

  • @ref: 70329
  • straininfo: 92137

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology39605The solubilisation of the membrane-bound D-alanyl-D-alanine carboxypeptidase of Bacillus coagulans NCIB 9365.McArthur HA, Reynolds PEBiochim Biophys Acta10.1016/0005-2744(79)90308-51979Bacillus/*enzymology, Binding Sites, Butanols, Carboxypeptidases/*isolation & purification, Cell Membrane/enzymology, Detergents, Hydrogen-Ion Concentration, Muramoylpentapeptide Carboxypeptidase/*isolation & purification/metabolism, Solubility, Sonication, UreaPhylogeny
Enzymology3089779Purification and characterization of Bacillus coagulans oligo-1,6-glucosidase.Suzuki Y, Tomura YEur J Biochem10.1111/j.1432-1033.1986.tb09723.x1986Amines/pharmacology, Amino Acids/analysis, Bacillus/*enzymology, Carbohydrates/pharmacology, Edetic Acid/pharmacology, Glycoside Hydrolases/*analysis, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Metals/pharmacology, Oligo-1,6-Glucosidase/*analysis/antagonists & inhibitors/isolation & purification, Substrate Specificity, Sulfhydryl Reagents/pharmacology, TemperaturePhylogeny
Enzymology7362828Purification and properties of the D-alanyl-D-alanine carboxypeptidase of Bacillus coagulans NCIB 9365.McArthur HA, Reynolds PEBiochim Biophys Acta10.1016/0005-2744(80)90283-11980Amino Acids/analysis, Bacillus/*enzymology, Carboxypeptidases/*metabolism, Chromatography, Affinity, Kinetics, Muramoylpentapeptide Carboxypeptidase/isolation & purification/*metabolism, SolubilityMetabolism
Enzymology8787404Analysis of the critical sites for protein thermostabilization by proline substitution in oligo-1,6-glucosidase from Bacillus coagulans ATCC 7050 and the evolutionary consideration of proline residues.Watanabe K, Kitamura K, Suzuki YAppl Environ Microbiol10.1128/aem.62.6.2066-2073.19961996Amino Acid Sequence, Bacillus/genetics/*metabolism, Bacterial Proteins/chemistry/genetics/*metabolism, Base Sequence, Binding Sites, Cloning, Molecular, DNA, Bacterial/genetics, Enzyme Stability, Evolution, Molecular, Genes, Bacterial, Molecular Sequence Data, Oligo-1,6-Glucosidase/chemistry/genetics/*metabolism, Proline/chemistry, Protein Structure, Secondary, Sequence Homology, Amino Acid, TemperatureMetabolism
Enzymology9692189Clustered proline residues around the active-site cleft in thermostable oligo-1,6-glucosidase of Bacillus flavocaldarius KP1228.Kashiwabara S, Matsuki Y, Kishimoto T, Suzuki YBiosci Biotechnol Biochem10.1271/bbb.62.10931998Amino Acid Sequence, Bacillus/*enzymology, Base Sequence, Binding Sites, Cloning, Molecular, Enzyme Stability, *Genes, Bacterial, Hot Temperature, Models, Molecular, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics, Proline/*analysis, Sequence Homology, Amino AcidStress
Cultivation10885006[Inhibition of Bacillus coagulans growth in laboratory media and in fruit purees].Cerrutti P, Alzamora SM, de Huergo MSRev Argent Microbiol2000Bacillus/*growth & development, Culture Media, Fruit/microbiology
Phylogeny16104349Streptomyces pharetrae sp. nov., isolated from soil from the semi-arid Karoo region.le Roes M, Meyers PRSyst Appl Microbiol10.1016/j.syapm.2005.03.0062005Antibiosis, Bacterial Typing Techniques, DNA, Ribosomal, *Desert Climate, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, South Africa, Streptomyces/*classification/genetics/*isolation & purification/physiologyGenetics
Phylogeny16672461Isolation and characterization of acid-tolerant, thermophilic bacteria for effective fermentation of biomass-derived sugars to lactic acid.Patel MA, Ou MS, Harbrucker R, Aldrich HC, Buszko ML, Ingram LO, Shanmugam KTAppl Environ Microbiol10.1128/AEM.72.5.3228-3235.20062006Bacillus/*classification/genetics/*isolation & purification/metabolism, *Biomass, DNA, Ribosomal/analysis, Fatty Acids/analysis, Fermentation, Glucose/*metabolism, Hot Temperature, Hydrogen-Ion Concentration, Lactic Acid/*metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Xylose/*metabolismMetabolism
Biotechnology16831501Application of the broad-spectrum bacteriocin enterocin AS-48 to inhibit Bacillus coagulans in canned fruit and vegetable foods.Lucas R, Grande MA, Abriouel H, Maqueda M, Ben Omar N, Valdivia E, Martinez-Canamero M, Galvez AFood Chem Toxicol10.1016/j.fct.2006.05.0192006Bacillus/*drug effects/growth & development, Bacteriocins/*pharmacology, Carbohydrates, Food Microbiology, Food Preservation/*methods, Fruit/*microbiology, Hot Temperature, Lactic Acid, Vegetables/*microbiologyStress
Phylogeny16935246Open L-lactic acid fermentation of food refuse using thermophilic Bacillus coagulans and fluorescence in situ hybridization analysis of microflora.Sakai K, Ezaki YJ Biosci Bioeng10.1263/jbb.101.4572006Bacteriocins/classification/genetics/*isolation & purification/*metabolism, Colony Count, Microbial/*methods, DNA, Bacterial/*analysis, Feasibility Studies, Fermentation, Food Industry, Food Microbiology, In Situ Hybridization, Fluorescence/*methods, Industrial Waste/*prevention & control, Lactic Acid/*metabolism, Polyesters, Polymers/metabolism, Sewage/microbiology, Species SpecificityMetabolism
Metabolism17933461Biosorption of Cr(VI) by three different bacterial species supported on granular activated carbon: a comparative study.Quintelas C, Fernandes B, Castro J, Figueiredo H, Tavares TJ Hazard Mater10.1016/j.jhazmat.2007.09.0272007Adsorption, Bacillus/*chemistry/metabolism, Biofilms, Biopolymers/metabolism, Carbon/*chemistry, Chromium/*chemistry, Escherichia coli/*chemistry/metabolism, Industrial Waste, Models, Chemical, Polysaccharides/metabolism, Streptococcus/*chemistry/metabolism, Waste Disposal, Fluid/methods, Water Pollutants, Chemical/*chemistryBiotechnology
Phylogeny17953573Characterization, N-terminal sequencing and classification of cerein MRX1, a novel bacteriocin purified from a newly isolated bacterium: Bacillus cereus MRX1.Sebei S, Zendo T, Boudabous A, Nakayama J, Sonomoto KJ Appl Microbiol10.1111/j.1365-2672.2007.03395.x2007Amino Acid Sequence, Amino Acids/analysis, Anti-Bacterial Agents/analysis/*biosynthesis/pharmacology, Bacillus/drug effects, Bacillus cereus/isolation & purification/*metabolism, Bacteriocins/genetics/*isolation & purification/pharmacology, Bacteriological Techniques, Base Sequence, *Food Microbiology, Listeria/drug effects, Magnetic Resonance Spectroscopy, Microbial Sensitivity Tests, Microbial Viability/drug effects, Molecular Sequence Data, Sequence Analysis, DNA, Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationPathogenicity
Enzymology19191946Characterization of lactosporin, a novel antimicrobial protein produced by Bacillus coagulans ATCC 7050.Riazi S, Wirawan RE, Badmaev V, Chikindas MLJ Appl Microbiol10.1111/j.1365-2672.2008.04105.x2009Anti-Bacterial Agents/isolation & purification/*metabolism/pharmacology, Bacillus/genetics/*metabolism, Bacteriocins/isolation & purification/*metabolism/pharmacology, Electrophoresis, Polyacrylamide Gel, Hydrogen-Ion Concentration, Isoelectric Point, Micrococcus luteus/drug effects, Polymerase Chain Reaction, Probiotics/pharmacology, TemperatureMetabolism
Phylogeny19605722Bacillus acidiproducens sp. nov., vineyard soil isolates that produce lactic acid.Jung MY, Kim JS, Chang YHInt J Syst Evol Microbiol10.1099/ijs.0.003913-02009Aerobiosis, Anaerobiosis, Bacillus/*classification/genetics/*isolation & purification/metabolism, Bacterial Typing Techniques, Base Composition, Catalase/metabolism, Cell Wall/chemistry, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Flagella/physiology, Galactose/analysis, Glucose/analysis, Korea, Lactic Acid/*metabolism, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidoreductases/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Spores, Bacterial/cytologyMetabolism
Pathogenicity22737982Mode of action and safety of lactosporin, a novel antimicrobial protein produced by Bacillus coagulans ATCC 7050.Riazi S, Dover SE, Chikindas MLJ Appl Microbiol10.1111/j.1365-2672.2012.05376.x2012Anti-Bacterial Agents/metabolism/*pharmacology, Bacillus/*metabolism, Bacteriocins/metabolism/*pharmacology, Female, Gardnerella vaginalis/*drug effects/growth & development, Humans, Hydrogen-Ion Concentration, Membrane Potentials/drug effects, Micrococcus luteus/drug effects, Potassium/analysis, Proton-Motive Force, Vagina/cytology/drug effects/microbiology, Vaginosis, Bacterial/drug therapyMetabolism
Enzymology22980006Thermal inactivation kinetics of Bacillus coagulans spores in tomato juice.Peng J, Mah JH, Somavat R, Mohamed H, Sastry S, Tang JJ Food Prot10.4315/0362-028X.JFP-11-4902012Area Under Curve, Bacillus/*physiology, Beverages/*microbiology, Colony Count, Microbial, Consumer Product Safety, Food Microbiology, *Hot Temperature, Hydrogen-Ion Concentration, Kinetics, Lycopersicon esculentum/*microbiology, Microbial Viability, Spores, Bacterial/growth & developmentBiotechnology
Pathogenicity24201025Open fermentative production of L-lactic acid with high optical purity by thermophilic Bacillus coagulans using excess sludge as nutrient.Ma K, Maeda T, You H, Shirai YBioresour Technol10.1016/j.biortech.2013.10.0222013Aerobiosis/drug effects, Anaerobiosis/drug effects, Bacillus/cytology/drug effects/growth & development/*metabolism, Batch Cell Culture Techniques, Biotechnology/*methods, Cell Proliferation/drug effects, Feasibility Studies, *Fermentation/drug effects, Glucose/metabolism, Hydrogen-Ion Concentration/drug effects, Lactic Acid/*biosynthesis, Nitrogen/pharmacology, *Optical Phenomena, Oxygen/pharmacology, Sewage/*microbiology, *TemperatureBiotechnology
Enzymology25862353Purification and characterization of a novel plantaricin, KL-1Y, from Lactobacillus plantarum KL-1.Rumjuankiat K, Perez RH, Pilasombut K, Keawsompong S, Zendo T, Sonomoto K, Nitisinprasert SWorld J Microbiol Biotechnol10.1007/s11274-015-1851-02015Bacteriocins/chemistry/*isolation & purification/*pharmacology, Chromatography, High Pressure Liquid, Chromatography, Ion Exchange, Fractional Precipitation, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Hydrogen-Ion Concentration, Hydrophobic and Hydrophilic Interactions, Lactobacillus plantarum/*metabolism, Microbial Viability/*drug effects, Molecular Weight, Peptides/chemistry/*isolation & purification/*pharmacology, Protein Stability, Sequence Analysis, Protein, TemperaturePathogenicity
Metabolism25983223Hemp hurds biorefining: A path to green L-(+)-lactic acid production.Gandolfi S, Pistone L, Ottolina G, Xu P, Riva SBioresour Technol10.1016/j.biortech.2015.04.1182015Bacillus/metabolism, Biomass, Cannabis/*metabolism, Carbohydrates, Cellulose/metabolism, Fermentation/physiology, Hydrolysis, Lactic Acid/*metabolism, Lignin/metabolism, Polymers/metabolism, Polysaccharides/metabolismBiotechnology
Cultivation27262567Systematic development and optimization of chemically defined medium supporting high cell density growth of Bacillus coagulans.Chen Y, Dong F, Wang YAppl Microbiol Biotechnol10.1007/s00253-016-7644-z2016Bacillus coagulans/*growth & development, Computer Simulation, Culture Media/*chemistry, Metabolic Flux Analysis, Models, Biological
Metabolism27885267Contributory roles of two l-lactate dehydrogenases for l-lactic acid production in thermotolerant Bacillus coagulans.Sun L, Zhang C, Lyu P, Wang Y, Wang L, Yu BSci Rep10.1038/srep379162016Bacillus coagulans/*enzymology/genetics/*growth & development/metabolism, Bacterial Proteins/genetics/metabolism, Fermentation, Gene Expression Profiling, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, L-Lactate Dehydrogenase/*genetics/metabolism, Lactic Acid/*metabolism, Molecular Sequence AnnotationEnzymology
29178877Non-sterilized fermentation of high optically pure D-lactic acid by a genetically modified thermophilic Bacillus coagulans strain.Zhang C, Zhou C, Assavasirijinda N, Yu B, Wang L, Ma YMicrob Cell Fact10.1186/s12934-017-0827-12017Bacillus coagulans/*chemistry, Fermentation, Genetic Engineering/*methods, Lactic Acid/*chemistry
30519284Simultaneous consumption of cellobiose and xylose by Bacillus coagulans to circumvent glucose repression and identification of its cellobiose-assimilating operons.Zheng Z, Jiang T, Zou L, Ouyang S, Zhou J, Lin X, He Q, Wang L, Yu B, Xu H, Ouyang JBiotechnol Biofuels10.1186/s13068-018-1323-52018
Pathogenicity30790661Dietary supplementation of probiotic Bacillus coagulans ATCC 7050, improves the growth performance, intestinal morphology, microflora, immune response, and disease confrontation of Pacific white shrimp, Litopenaeus vannamei.Amoah K, Huang QC, Tan BP, Zhang S, Chi SY, Yang QH, Liu HY, Dong XHFish Shellfish Immunol10.1016/j.fsi.2019.02.0292019Animal Feed/analysis, Animals, Bacillus coagulans/*chemistry, Body Composition, Diet, Immunity, Innate/*drug effects, Intestines/anatomy & histology, Penaeidae/anatomy & histology/growth & development/*immunology, Probiotics/pharmacology, Random Allocation, Vibrio parahaemolyticus/physiology
Metabolism31101607Elucidating the Role and Regulation of a Lactate Permease as Lactate Transporter in Bacillus coagulans DSM1.Wang Y, Zhang C, Liu G, Ju J, Yu B, Wang LAppl Environ Microbiol10.1128/AEM.00672-192019Bacillus coagulans/*genetics/metabolism, Bacterial Proteins/*genetics/metabolism, Fermentation, *Gene Expression Regulation, Bacterial, Lactic Acid/*metabolism, Monocarboxylic Acid Transporters/*genetics/metabolism
Genetics31964505Genome based safety assessment for Bacillus coagulans strain LBSC (DSM 17654) for probiotic application.Saroj DB, Gupta AKInt J Food Microbiol10.1016/j.ijfoodmicro.2020.1085232020Bacillus coagulans/*genetics, Bacterial Proteins/genetics, Base Sequence, Consumer Product Safety, DNA, Bacterial/genetics, Genome, Bacterial/*genetics, Genomic Instability, *Probiotics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNATranscriptome
33297479Effect of Physical and Chemical Treatments on Viability, Sub-Lethal Injury, and Release of Cellular Components from Bacillus clausii and Bacillus coagulans Spores and Cells.Bevilacqua A, Petruzzi L, Sinigaglia M, Speranza B, Campaniello D, Ciuffreda E, Corbo MRFoods10.3390/foods91218142020
Biotechnology33501803[Expression and characterization of beta-N-acetylglucosaminidases from Bacillus coagulans DSM1 for N-acetyl-beta-D glucosamine production].Li C, Jiang S, Du C, Zhou Y, Jiang S, Zhang GSheng Wu Gong Cheng Xue Bao10.13345/j.cjb.2001902021Acetylglucosamine, Acetylglucosaminidase, *Bacillus coagulans, Chitin, *Chitinases, Hydrogen-Ion Concentration, Recombinant Proteins/genetics
Biotechnology34074410Rapid detection and discrimination of food-related bacteria using IR-microspectroscopy in combination with multivariate statistical analysis.Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul PTalanta10.1016/j.talanta.2021.1224242021*Bacteria, Discriminant Analysis, *Food Microbiology, Multivariate Analysis, Spectrophotometry, Infrared, Spectroscopy, Fourier Transform Infrared
Biotechnology34592620Third-generation L-Lactic acid production by the microwave-assisted hydrolysis of red macroalgae Eucheuma denticulatum extract.Tong KTX, Tan IS, Foo HCY, Tiong ACY, Lam MK, Lee KTBioresour Technol10.1016/j.biortech.2021.1258802021*Chlorella vulgaris, Fermentation, Hydrolysis, Lactic Acid, Microwaves, Plant Extracts, *Seaweed
Enzymology34600697Development and validation of a predictive model for the effect of temperature, pH and water activity on the growth kinetics of Bacillus coagulans in non-refrigerated ready-to-eat food products.Misiou O, Zourou C, Koutsoumanis KFood Res Int10.1016/j.foodres.2021.1107052021*Bacillus coagulans, Food Microbiology, Hydrogen-Ion Concentration, Kinetics, Temperature, WaterBiotechnology
Pathogenicity34975786A Rapid Screening Method of Candidate Probiotics for Inflammatory Bowel Diseases and the Anti-inflammatory Effect of the Selected Strain Bacillus smithii XY1.Huang X, Ai F, Ji C, Tu P, Gao Y, Wu Y, Yan F, Yu TFront Microbiol10.3389/fmicb.2021.7603852021
Phylogeny36087123Weizmannia faecalis sp. nov., isolated from a human stool sample.Kieu HT, Pham TPT, Lo CI, Alibar S, Brechard L, Armstrong N, Decloquement P, Diallo A, Sokhna C, Million M, Lagier JC, Raoult D, Tidjani Alou MArch Microbiol10.1007/s00203-022-03229-62022*Bacillaceae/genetics, Base Composition, DNA, Bacterial/genetics, Humans, Phylogeny, RNA, Ribosomal, 16S/geneticsPathogenicity
36517529In vitro assessment of probiotic attributes for strains contained in commercial formulations.Mazzantini D, Calvigioni M, Celandroni F, Lupetti A, Ghelardi ESci Rep10.1038/s41598-022-25688-z2022

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41798Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/10248
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66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
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68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
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