Strain identifier
BacDive ID: 6462
Type strain: 
Species: Lactobacillus sp.
Strain Designation: S-14
Strain history: IFO 13118 <-- RIB 9114.
NCBI tax ID(s): 418199 (species)
version 9 (current version)
General
@ref: 8615
BacDive-ID: 6462
DSM-Number: 20353
keywords: 16S sequence, Bacteria
description: Lactobacillus sp. S-14 is a bacterium that was isolated from spoilt sake.
NCBI tax id
- NCBI tax id: 418199
- Matching level: species
strain history
| @ref | history |
|---|---|
| 8615 | <- K. Nosiro, S-14 |
| 67770 | IFO 13118 <-- RIB 9114. |
doi: 10.13145/bacdive6462.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lactobacillus
- species: Lactobacillus sp.
- full scientific name: Lactobacillus Beijerinck 1901 (Approved Lists 1980)
@ref: 8615
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus sp.
full scientific name: Lactobacillus sp.
strain designation: S-14
type strain: no
Culture and growth conditions
culture medium
- @ref: 8615
- name: LACTOBACILLUS MEDIUM II (DSMZ Medium 93)
- growth: yes
- link: https://mediadive.dsmz.de/medium/93
- composition: Name: LACTOBACILLUS MEDIUM II (DSMZ Medium 93) Composition: Na-acetate 20.0 g/l Glucose 20.0 g/l Agar 15.0 g/l Casein peptone 10.0 g/l Yeast extract 5.0 g/l Meat extract 2.0 g/l K2HPO4 0.5 g/l KH2PO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l DL-mevalonic acid 0.03 g/l FeSO4 x 7 H2O 0.01 g/l MnSO4 x H2O 0.0075 g/l Tween 80 Ethanol Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 8615 | positive | growth | 26 |
| 67770 | positive | growth | 30 |
Physiology and metabolism
murein
- @ref: 8615
- murein short key: A11.31
- type: A4alpha L-Lys-D-Asp
Isolation, sampling and environmental information
isolation
- @ref: 8615
- sample type: spoilt sake
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Fermented |
| #Environmental | #Microbial community | |
| #Engineered | #Food production | #Beverage |
taxonmaps
- @ref: 69479
- File name: preview.99_7067.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_46;96_3312;97_4062;98_5193;99_7067&stattab=map
- Last taxonomy: Lactobacillus acetotolerans subclade
- 16S sequence: AB680369
- Sequence Identity:
- Total samples: 9628
- soil counts: 1475
- aquatic counts: 1136
- animal counts: 6619
- plant counts: 398
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Lactobacillus fructivorans gene for 16S rRNA, partial sequence, strain: NBRC 13118 | AB680369 | 1494 | nuccore | 1614 |
| 20218 | L.hetero (13118) 16S - 23S ribosomal RNA spacer region | X74224 | 585 | nuccore | 29398 |
| 124043 | Lactobacillus sp. JCM 7527 gene for 16S rRNA, partial sequence, strain: JCM 7527. | AB289118 | 659 | nuccore | 418199 |
GC content
- @ref: 8615
- GC-content: 38.8
External links
@ref: 8615
culture collection no.: DSM 20353, ATCC 27742, IFO 13118, NBRC 13118, JCM 7527
straininfo link
- @ref: 75934
- straininfo: 3297
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 8615 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20353) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20353 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 75934 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID3297.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |