Strain identifier

BacDive ID: 5111

Type strain: No

Species: Salmonella enterica subsp. enterica

Strain Designation: 775/W, Col Sal 385/57, 493, W 775, 775W

Strain history: <- ATCC <- NCTC (Salmonella sp.) <- J. Taylor; 493

NCBI tax ID(s): 59201 (subspecies)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 3788

BacDive-ID: 5111

DSM-Number: 10062

keywords: genome sequence, Bacteria, mesophilic, motile

description: Salmonella enterica subsp. enterica 775/W is a mesophilic, motile bacterium of the family Enterobacteriaceae.

NCBI tax id

  • NCBI tax id: 59201
  • Matching level: subspecies

strain history

  • @ref: 3788
  • history: <- ATCC <- NCTC (Salmonella sp.) <- J. Taylor; 493

doi: 10.13145/bacdive5111.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Salmonella
  • species: Salmonella enterica subsp. enterica
  • full scientific name: Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

  • synonyms

    • @ref: 20215
    • synonym: Salmonella choleraesuis subsp. choleraesuis

@ref: 3788

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Enterobacteriaceae

genus: Salmonella

species: Salmonella enterica subsp. enterica

full scientific name: Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

strain designation: 775/W, Col Sal 385/57, 493, W 775, 775W

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes95.012
6948099.994negative

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3788TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
3788CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 3788
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.869

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose+fermentation
6836827613amygdalin-fermentation
6836828053melibiose+fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose+fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine+degradation
6836825094lysine+degradation
6836829016arginine+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

  • @ref: 68368
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase+4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase-3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
3788-++++----+-++-++-+-+-
3788-++++------++-++-+-+-

Safety information

risk assessment

  • @ref: 3788
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Salmonella enterica subsp. enterica serovar Senftenberg 775W (ATCC 43845)GCA_001969425completencbi28150
66792Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845GCA_000486525completencbi930772
66792Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845930772.3wgspatric930772
66792Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845930772.4plasmidpatric930772
66792Salmonella enterica subsp. enterica serovar Senftenberg strain 775W28150.29completepatric28150
66792Salmonella enterica subsp. enterica serovar Senftenberg strain 775W strain 775W (ATCC 43845)28150.46plasmidpatric28150
66792Salmonella enterica enterica sv. Senftenberg ATCC 438452852366756completeimg930772
66792Salmonella enterica enterica sv. Senftenberg ATCC 438452872672955completeimg930772

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
flagellatedyes54.319no
gram-positiveno98.47no
anaerobicno91.127no
aerobicyes69.204no
halophileno93.59no
spore-formingno93.506no
glucose-utilyes92.268no
thermophileno98.997no
motileyes91.152no
glucose-fermentyes92.647yes

External links

@ref: 3788

culture collection no.: DSM 10062, ATCC 43845, NCTC 9959

straininfo link

  • @ref: 74604
  • straininfo: 45171

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Biotechnology10772209Inactivation of Salmonella Enteritidis, Salmonella Typhimurium, and Salmonella Senftenberg by ultrasonic waves under pressure.Manas P, Pagan R, Raso J, Sala FJ, Condon SJ Food Prot10.4315/0362-028x-63.4.4512000Animals, Chickens, *Food Microbiology, Food Preservation/*methods, Ovum/microbiology, *Salmonella, Salmonella enteritidis, Salmonella typhimurium, Ultrasonics
Biotechnology12927706Predicting thermal inactivation in media of different pH of Salmonella grown at different temperatures.Manas P, Pagan R, Raso J, Condon SInt J Food Microbiol10.1016/s0168-1605(03)00049-72003Culture Media/chemistry, Food Microbiology, *Hydrogen-Ion Concentration, Kinetics, Mathematics, Models, Biological, Salmonella/*growth & development, Salmonella enteritidis/growth & development, Salmonella typhimurium/growth & development, *TemperatureEnzymology
Genetics28293682Genome Sequence of the Thermotolerant Foodborne Pathogen Salmonella enterica Serovar Senftenberg ATCC 43845 and Phylogenetic Analysis of Loci Encoding Increased Protein Quality Control Mechanisms.Nguyen SV, Harhay GP, Bono JL, Smith TP, Harhay DMmSystems10.1128/mSystems.00190-162017Phylogeny
Genetics29954894Complete Genome Sequence of the Novel Virulent Phage PMBT28 with Lytic Activity against Thermotolerant Salmonella enterica subsp. enterica Serovar Senftenberg ATCC 43845.Koberg S, Brinks E, Albrecht V, Neve H, Franz CMAPGenome Announc10.1128/genomeA.00568-182018

Reference

@idauthorscataloguedoi/urltitle
3788Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10062)https://www.dsmz.de/collection/catalogue/details/culture/DSM-10062
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68368Automatically annotated from API 20E
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
74604Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID45171.1StrainInfo: A central database for resolving microbial strain identifiers