Strain identifier
General
@ref: 793
BacDive-ID: 2528
DSM-Number: 1496
keywords: Bacteria, 16S sequence, genome sequence, anaerobe, mesophilic
description: Clostridium aceticum DSM 1496 is an anaerobe, mesophilic bacterium that was isolated from mud.
strain history: <- M. Braun, Universität Göttingen, Germany <- H. A. Barker, University of California, Berkeley, USA <- K. T. Wieringa, Agricultural University Wageningen, Laboratory of Microbiology, Netherlands
doi: 10.13145/bacdive2528.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/firmicutes
- domain: Bacteria
- phylum: Firmicutes
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium aceticum
- full scientific name: Clostridium aceticum (ex Wieringa 1940) Gottschalk and Braun 1981
@ref: 793
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium aceticum
full scientific name: Clostridium aceticum (ex Wieringa 1940) Gottschalk and Braun 1981
type strain: yes
Culture and growth conditions
culture medium
- @ref: 793
- name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135), anaerobic
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium135.pdf
culture temp
- @ref: 793
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 793
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 793
- sample type: mud
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Mud (Sludge)
Safety information
risk assessment
- @ref: 793
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 793
- description: Clostridium aceticum 16S rRNA gene, partial, strain DSM 1496
- accession: Y18183
- length: 1368
- database: ena
- NCBI tax ID: 84022
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Clostridium aceticum DSM 1496 | GCA_001042715 | complete | ncbi | 84022 |
| 66792 | Clostridium aceticum DSM 1496 | GCA_000949285 | scaffold | ncbi | 84022 |
| 66792 | Clostridium aceticum strain DSM 1496 | 84022.6 | complete | patric | 84022 |
| 66792 | Clostridium aceticum strain DSM 1496 | 84022.5 | wgs | patric | 84022 |
| 66792 | Clostridium aceticum strain DSM 1496 | 84022.13 | plasmid | patric | 84022 |
GC content
- @ref: 793
- GC-content: 33.0
External links
@ref: 793
culture collection no.: DSM 1496, ATCC 35044
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/45136 |
| 20218 | http://www.straininfo.net/strains/45135 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 793 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1496) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1496 | |||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |