Strain identifier

BacDive ID: 2528

Type strain: Yes

Species: Clostridium aceticum

Culture col. no.: DSM 1496, ATCC 35044

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 793

BacDive-ID: 2528

DSM-Number: 1496

keywords: Bacteria, 16S sequence, genome sequence, anaerobe, mesophilic

description: Clostridium aceticum DSM 1496 is an anaerobe, mesophilic bacterium that was isolated from mud.

strain history: <- M. Braun, Universität Göttingen, Germany <- H. A. Barker, University of California, Berkeley, USA <- K. T. Wieringa, Agricultural University Wageningen, Laboratory of Microbiology, Netherlands

doi: 10.13145/bacdive2528.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/firmicutes
  • domain: Bacteria
  • phylum: Firmicutes
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium aceticum
  • full scientific name: Clostridium aceticum (ex Wieringa 1940) Gottschalk and Braun 1981

@ref: 793

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridiaceae

genus: Clostridium

species: Clostridium aceticum

full scientific name: Clostridium aceticum (ex Wieringa 1940) Gottschalk and Braun 1981

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 793
  • name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135), anaerobic
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium135.pdf

culture temp

  • @ref: 793
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 793
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 793
  • sample type: mud

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Mud (Sludge)

Safety information

risk assessment

  • @ref: 793
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 793
  • description: Clostridium aceticum 16S rRNA gene, partial, strain DSM 1496
  • accession: Y18183
  • length: 1368
  • database: ena
  • NCBI tax ID: 84022

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Clostridium aceticum DSM 1496GCA_001042715completencbi84022
66792Clostridium aceticum DSM 1496GCA_000949285scaffoldncbi84022
66792Clostridium aceticum strain DSM 149684022.6completepatric84022
66792Clostridium aceticum strain DSM 149684022.5wgspatric84022
66792Clostridium aceticum strain DSM 149684022.13plasmidpatric84022

GC content

  • @ref: 793
  • GC-content: 33.0

External links

@ref: 793

culture collection no.: DSM 1496, ATCC 35044

straininfo link

@refpassport
20218http://www.straininfo.net/strains/45136
20218http://www.straininfo.net/strains/45135

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
793Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1496)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1496
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)