Strain identifier
BacDive ID: 24118
Type strain:
Species: Fusicatenibacter saccharivorans
Strain Designation: KO-38
Strain history: <- T. Takada, Yakult Central Inst. Microbiol. Res., Kunitachi, Japan; YIT 12555 <- T. Takada {2011}
NCBI tax ID(s): 1150298 (species)
General
@ref: 21280
BacDive-ID: 24118
DSM-Number: 26063
keywords: 16S sequence, Bacteria, anaerobe
description: Fusicatenibacter saccharivorans KO-38 is an anaerobe bacterium that was isolated from feces of healthy Japanese adult.
NCBI tax id
- NCBI tax id: 1150298
- Matching level: species
strain history
- @ref: 21280
- history: <- T. Takada, Yakult Central Inst. Microbiol. Res., Kunitachi, Japan; YIT 12555 <- T. Takada {2011}
doi: 10.13145/bacdive24118.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Lachnospiraceae
- genus: Fusicatenibacter
- species: Fusicatenibacter saccharivorans
- full scientific name: Fusicatenibacter saccharivorans Takada et al. 2013
@ref: 21280
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Lachnospiraceae
genus: Fusicatenibacter
species: Fusicatenibacter saccharivorans
full scientific name: Fusicatenibacter saccharivorans Takada et al. 2013
strain designation: KO-38
type strain: no
Culture and growth conditions
culture medium
- @ref: 21280
- name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104c
- composition: Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
culture temp
- @ref: 21280
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 21280
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 21280
- sample type: feces of healthy Japanese adult
- country: Japan
- origin.country: JPN
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
Safety information
risk assessment
- @ref: 21280
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21280
- description: Fusicatenibacter saccharivorans gene for 16S ribosomal RNA, partial sequence, strain: KO-38
- accession: AB698914
- length: 1392
- database: nuccore
- NCBI tax ID: 1150298
GC content
- @ref: 21280
- GC-content: 47.2
- method: high performance liquid chromatography (HPLC)
External links
@ref: 21280
culture collection no.: DSM 26063, YIT 12555
straininfo link
- @ref: 88078
- straininfo: 399505
literature
- topic: Phylogeny
- Pubmed-ID: 23625266
- title: Fusicatenibacter saccharivorans gen. nov., sp. nov., isolated from human faeces.
- authors: Takada T, Kurakawa T, Tsuji H, Nomoto K
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.045823-0
- year: 2013
- mesh: Adult, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Feces/*microbiology, Gram-Positive Asporogenous Rods/*classification/genetics/isolation & purification, Humans, Lysine/analysis, Middle Aged, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Pathogenicity
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
21280 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26063 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26063) | |
88078 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399505.1 |