Strain identifier

BacDive ID: 24118

Type strain: No

Species: Fusicatenibacter saccharivorans

Strain Designation: KO-38

Strain history: <- T. Takada, Yakult Central Inst. Microbiol. Res., Kunitachi, Japan; YIT 12555 <- T. Takada {2011}

NCBI tax ID(s): 1150298 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 21280

BacDive-ID: 24118

DSM-Number: 26063

keywords: 16S sequence, Bacteria, anaerobe

description: Fusicatenibacter saccharivorans KO-38 is an anaerobe bacterium that was isolated from feces of healthy Japanese adult.

NCBI tax id

  • NCBI tax id: 1150298
  • Matching level: species

strain history

  • @ref: 21280
  • history: <- T. Takada, Yakult Central Inst. Microbiol. Res., Kunitachi, Japan; YIT 12555 <- T. Takada {2011}

doi: 10.13145/bacdive24118.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Lachnospiraceae
  • genus: Fusicatenibacter
  • species: Fusicatenibacter saccharivorans
  • full scientific name: Fusicatenibacter saccharivorans Takada et al. 2013

@ref: 21280

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Lachnospiraceae

genus: Fusicatenibacter

species: Fusicatenibacter saccharivorans

full scientific name: Fusicatenibacter saccharivorans Takada et al. 2013

strain designation: KO-38

type strain: no

Culture and growth conditions

culture medium

  • @ref: 21280
  • name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/104c
  • composition: Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

culture temp

  • @ref: 21280
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 21280
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 21280
  • sample type: feces of healthy Japanese adult
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Safety information

risk assessment

  • @ref: 21280
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 21280
  • description: Fusicatenibacter saccharivorans gene for 16S ribosomal RNA, partial sequence, strain: KO-38
  • accession: AB698914
  • length: 1392
  • database: nuccore
  • NCBI tax ID: 1150298

GC content

  • @ref: 21280
  • GC-content: 47.2
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 21280

culture collection no.: DSM 26063, YIT 12555

straininfo link

  • @ref: 88078
  • straininfo: 399505

literature

  • topic: Phylogeny
  • Pubmed-ID: 23625266
  • title: Fusicatenibacter saccharivorans gen. nov., sp. nov., isolated from human faeces.
  • authors: Takada T, Kurakawa T, Tsuji H, Nomoto K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.045823-0
  • year: 2013
  • mesh: Adult, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Feces/*microbiology, Gram-Positive Asporogenous Rods/*classification/genetics/isolation & purification, Humans, Lysine/analysis, Middle Aged, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
  • topic2: Pathogenicity

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21280Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26063Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26063)
88078Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399505.1