Strain identifier

BacDive ID: 23306

Type strain: Yes

Species: Streptomyces viridis

Strain Designation: BK199

Culture col. no.: DSM 42078, CGMCC 4.6824, KACC 21003

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 18933

BacDive-ID: 23306

DSM-Number: 42078

keywords: mesophilic, spore-forming, aerobe, Bacteria, 16S sequence, gram-positive, rod-shaped

description: Streptomyces viridis BK199 is an aerobe, spore-forming, mesophilic bacterium that was isolated from hay meadow soil.

strain history: <- S.-W. Kwon, KACC; KACC 21003

doi: 10.13145/bacdive23306.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Streptomycetales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces viridis
  • full scientific name: Streptomyces viridis Kim et al. 2013

@ref: 18933

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces viridis

full scientific name: Streptomyces viridis Kim et al. 2013

strain designation: BK199

type strain: yes

Morphology

cell morphology

  • @ref: 30851
  • gram stain: positive
  • cell length: 0.7 µm
  • cell width: 0.65 µm
  • cell shape: rod-shaped

multimedia

  • @ref: 18933
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42078.jpg
  • caption: Medium 65 28°C
  • license or copyright: (C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
  • intellectual property rights: © Leibniz-Institut DSMZ

pigmentation

  • @ref: 30851
  • production: yes

Culture and growth conditions

culture medium

  • @ref: 18933
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf

culture temp

@refgrowthtypetemperaturerange
18933positivegrowth28mesophilic
30851positivegrowth10-37
30851positiveoptimum30mesophilic

culture pH

@refabilitytypepH
30851positivegrowth05-09
30851positiveoptimum7

Physiology and metabolism

oxygen tolerance

  • @ref: 30851
  • oxygen tolerance: aerobe

spore formation

  • @ref: 30851
  • spore formation: yes

observation

  • @ref: 30851
  • observation: aggregates in chains

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3085118403L-arabitol+carbon source
3085116947citrate+carbon source
3085124996lactate+carbon source
3085117306maltose+carbon source
3085128053melibiose+carbon source
3085130911sorbitol+carbon source
3085130031succinate+carbon source
308514853esculin+hydrolysis

enzymes

@refvalueactivityec
30851catalase+1.11.1.6
30851gelatinase+

Isolation, sampling and environmental information

isolation

  • @ref: 18933
  • sample type: hay meadow soil
  • geographic location: Northumberland, Cockle Park Experimental Farm, Palace Leas hay meadow plot 6
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Meadow
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)

Safety information

risk assessment

  • @ref: 18933
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 18933
  • description: Streptomyces viridis Kim et al. 2013 partial 16S rRNA gene, type strain BK199T
  • accession: FR692117
  • length: 1458
  • database: ena
  • NCBI tax ID: 887475

GC content

@refGC-contentmethod
1893370.2fluorimetric
3085170.2

External links

@ref: 18933

culture collection no.: DSM 42078, CGMCC 4.6824, KACC 21003

straininfo link

@refpassport
20218http://www.straininfo.net/strains/886922
20218http://www.straininfo.net/strains/886923

Reference

@idauthorscataloguedoi/urltitlejournalpubmedID_cross_reference
18933Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42078)https://www.dsmz.de/collection/catalogue/details/culture/DSM-42078
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
2718110.1099/ijs.0.045906-0
30851Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information27181