General

@ref: 6552

BacDive-ID: 17202

DSM-Number: 16652

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Sporomusa rhizae RS is an anaerobe, mesophilic bacterium that was isolated from root of Juncus roemerianus.

NCBI tax id

• NCBI tax id: 357999
• Matching level: species

strain history

• @ref: 6552
• history: <- H. L. Drake, University of Bayreuth, Department of Ecological Microbiology, Bayreuth, Germany; RS <- A. S. Gößner {2004}

doi: 10.13145/bacdive17202.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Negativicutes
• order: Selenomonadales
• family: Sporomusaceae
• genus: Sporomusa
• species: Sporomusa rhizae
• full scientific name: Sporomusa rhizae Gößner et al. 2006

@ref: 6552

domain: Bacteria

phylum: Firmicutes

class: Negativicutes

order: Selenomonadales

family: Sporomusaceae

genus: Sporomusa

species: Sporomusa rhizae

full scientific name: Sporomusa rhizae Gößner et al. 2006

strain designation: RS

type strain: yes

Culture and growth conditions

culture medium

• @ref: 6552
• name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c)
• growth: yes
• link: https://mediadive.dsmz.de/medium/311c
• composition: Name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c; with strain-specific modifications) Composition: NaCl 2.23881 g/l Yeast extract 1.99005 g/l Casitone 1.99005 g/l N-Acetyl-D-glucosamine 1.10448 g/l Na2CO3 0.995025 g/l NH4Cl 0.497512 g/l MgSO4 x 7 H2O 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l Sodium resazurin 0.000497512 g/l NaOH 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxine hydrochloride 9.95025e-05 g/l MnCl2 x 4 H2O 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Biotin 1.99005e-05 g/l Folic acid 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water

culture temp

• @ref: 6552
• growth: positive
• type: growth
• temperature: 35
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 6552
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 6552
• sample type: root of Juncus roemerianus
• host species: Juncus roemerianus
• geographic location: South Carolina
• country: USA
• origin.country: USA
• continent: North America

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_113554.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_208;96_726;97_57986;98_76912;99_113554&stattab=map
• Last taxonomy: Sporomusa rhizae subclade
• 16S sequence: AM158322
• Sequence Identity:
• Total samples: 158
• soil counts: 96
• aquatic counts: 44
• animal counts: 15
• plant counts: 3

Safety information

risk assessment

• @ref: 6552
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 6552
• description: Sporomusa rhizae partial 16S rRNA gene, type strain RS
• accession: AM158322
• length: 1387
• database: ena
• NCBI tax ID: 357999

External links

@ref: 6552

culture collection no.: DSM 16652, ATCC BAA 1028

straininfo link

• @ref: 86201
• straininfo: 403513

Reference