Strain identifier
BacDive ID: 164825
Type strain: 
Species: Clostridium perfringens
Strain history: ATCC 3629 <-- I. C. Hall.
NCBI tax ID(s): 1502 (species)
General
@ref: 67770
BacDive-ID: 164825
keywords: 16S sequence, Bacteria, mesophilic, toxin production
description: Clostridium perfringens JCM 3819 is a mesophilic bacterium that produces toxins and was isolated from Lamb with "pulpy kidney".
NCBI tax id
- NCBI tax id: 1502
- Matching level: species
strain history
- @ref: 67770
- history: ATCC 3629 <-- I. C. Hall.
doi: 10.13145/bacdive164825.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium perfringens
- full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus perfringens
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Clostridiaceae
genus: Clostridium
species: Clostridium perfringens
full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 67770 | haemolysins |
| 67770 | lethal toxins |
enzymes
- @ref: 67770
- value: phospholipase C
- ec: 3.1.4.11
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Lamb with "pulpy kidney"
taxonmaps
- @ref: 69479
- File name: preview.99_335.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_34;96_235;97_257;98_286;99_335&stattab=map
- Last taxonomy: Clostridium perfringens subclade
- 16S sequence: LC037206
- Sequence Identity:
- Total samples: 88326
- soil counts: 3063
- aquatic counts: 8762
- animal counts: 75654
- plant counts: 847
Sequence information
16S sequences
- @ref: 67770
- description: Clostridium perfringens gene for 16S ribosomal RNA, partial sequence, strain: JCM 3819
- accession: LC037206
- length: 1474
- database: ena
- NCBI tax ID: 1502
External links
@ref: 67770
culture collection no.: JCM 3819, ATCC 3629, BCRC 10914, NCIMB 10663
straininfo link
- @ref: 114255
- straininfo: 44353
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114255 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID44353.1 |