Strain identifier
BacDive ID: 163787
Type strain: 
Species: Nitrosococcus halophilus
Strain history: M. G. Klotz; Univ. of N. Carolina at Charlotte, USA; Nc4.
NCBI tax ID(s): 133539 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 163787
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Nitrosococcus halophilus JCM 30413 is a mesophilic bacterium that was isolated from Salt lagoon.
NCBI tax id
- NCBI tax id: 133539
- Matching level: species
strain history
- @ref: 67770
- history: M. G. Klotz; Univ. of N. Carolina at Charlotte, USA; Nc4.
doi: 10.13145/bacdive163787.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Chromatiales
- family: Chromatiaceae
- genus: Nitrosococcus
- species: Nitrosococcus halophilus
- full scientific name: Nitrosococcus halophilus Campbell et al. 2011
synonyms
- @ref: 20215
- synonym: Nitrosococcus halophilus
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Chromatiales
family: Chromatiaceae
genus: Nitrosococcus
species: Nitrosococcus halophilus
full scientific name: Nitrosococcus halophilus Koops et al.
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Salt lagoon
- geographic location: Sardinia
- country: Italy
- origin.country: ITA
- continent: Europe
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Nitrosococcus halophilus Nc4 16S ribosomal RNA gene, partial sequence | AF287298 | 1539 | ena | 472759 |
| 67770 | Nitrosococcus halophilus partial 16S rRNA gene, isolate Nc4 | AJ298748 | 1427 | ena | 472759 |
Genome sequences
- @ref: 67770
- description: Nitrosococcus halophilus Nc 4
- accession: GCA_000024725
- assembly level: complete
- database: ncbi
- NCBI tax ID: 472759
External links
@ref: 67770
culture collection no.: JCM 30413
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |