Cite this strain

"Nitrosococcus halophilus" (JCM 30413)

BacDive ID 163787

Type strain

Culture col. no. JCM 30413

NCBI tax ID(s) 133539

Special Collections JCM

"Nitrosococcus halophilus" JCM 30413 is a mesophilic prokaryote that was isolated from Salt lagoon.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

Culture Collection Numbers

JCM 30413

@ref 20215

Last LPSN update 2025-12-16 10:09:18

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Chromatiales

Family Chromatiaceae

Genus Nitrosococcus

Species "Nitrosococcus halophilus"

Full scientific name Nitrosococcus halophilus Campbell et al. 2011

Synonyms (1)

"Nitrosococcus halophilus"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Salt lagoon	Sardinia	Italy	ITA	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM2472v1 assembly for Nitrosococcus halophilus Nc 4	complete	GCA_000024725	472759.3	646564556	472759	97.76

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Nitrosococcus halophilus Nc4 16S ribosomal RNA gene, partial sequence	AF287298	1539		472759
67770	Nitrosococcus halophilus partial 16S rRNA gene, isolate Nc4	AJ298748	1427		472759

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
Proterozoic Acquisition of Archaeal Genes for Extracellular Electron Transfer: A Metabolic Adaptation of Aerobic Ammonia-Oxidizing Bacteria to Oxygen Limitation.	Gulay A, Fournier G, Smets BF, Girguis PR.	Mol Biol Evol	10.1093/molbev/msad161	2023

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;

Rate our new design

Content

About us

"Nitrosococcus halophilus" (JCM 30413)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000024725

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media