Strain identifier

BacDive ID: 161372

Type strain: Yes

Species: Thermococcus onnurineus

Strain history: J.-H. Lee NA1.

NCBI tax ID(s): 342948 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 161372

keywords: genome sequence, 16S sequence, Archaea, hyperthermophilic

description: Thermococcus onnurineus JCM 13517 is a hyperthermophilic archaeon that was isolated from Deep-sea hydrothermal vent area within the Papua New Guinea-Australia-Canada-Manus field.

NCBI tax id

  • NCBI tax id: 342948
  • Matching level: species

strain history

  • @ref: 67770
  • history: J.-H. Lee NA1.

doi: 10.13145/bacdive161372.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Thermococci
  • order: Thermococcales
  • family: Thermococcaceae
  • genus: Thermococcus
  • species: Thermococcus onnurineus
  • full scientific name: Thermococcus onnurineus Bae et al. 2006

@ref: 67770

domain: Archaea

phylum: Euryarchaeota

class: Thermococci

order: Thermococcales

family: Thermococcaceae

genus: Thermococcus

species: Thermococcus onnurineus

full scientific name: Thermococcus onnurineus Bae et al.

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 80
  • range: hyperthermophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Deep-sea hydrothermal vent area (1,650 m in depth) within the Papua New Guinea-Australia-Canada-Manus (PACMANUS) field

Sequence information

16S sequences

  • @ref: 67770
  • description: Thermococcus onnurineus strain NA1 16S ribosomal RNA gene, partial sequence
  • accession: DQ167232
  • length: 1457
  • database: ena
  • NCBI tax ID: 523850

Genome sequences

  • @ref: 67770
  • description: Thermococcus onnurineus NA1
  • accession: GCA_000018365
  • assembly level: complete
  • database: ncbi
  • NCBI tax ID: 523850

GC content

  • @ref: 67770
  • GC-content: 52
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 13517, KCTC 10859

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/