General

@ref: 67770

BacDive-ID: 161010

keywords: 16S sequence, Bacteria

description: Pedobacter sp. JCM 10638 is a bacterium that was isolated from Water of the Arakawa River.

NCBI tax id

• NCBI tax id: 1411316
• Matching level: species

strain history

• @ref: 67770
• history: Y. Doi KP-2.

doi: 10.13145/bacdive161010.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Sphingobacteriia
• order: Sphingobacteriales
• family: Sphingobacteriaceae
• genus: Pedobacter
• species: Pedobacter sp.
• full scientific name: Pedobacter Steyn et al. 1998

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Sphingobacteriia

order: Sphingobacteriales

family: Sphingobacteriaceae

genus: Pedobacter

species: Pedobacter sp.

full scientific name: Pedobacter sp.

type strain: no

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 25

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Water of the Arakawa River
• geographic location: Saitama Pref.
• country: Japan
• origin.country: JPN
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Pedobacter sp. KP-2 16S rRNA, partial sequence
• accession: AB033630
• length: 1000
• database: nuccore
• NCBI tax ID: 106111

External links

@ref: 67770

culture collection no.: JCM 10638

literature

• topic: Metabolism
• Pubmed-ID: 11710094
• title: Microbial degradation of poly(aspartic acid) by two isolated strains of Pedobacter sp. and Sphingomonas sp.
• authors: Tabata K, Abe H, Doi Y
• journal: Biomacromolecules
• DOI: 10.1021/bm9900038
• year: 2000
• mesh: Bacteria/*metabolism, Biodegradation, Environmental, Fresh Water, Magnetic Resonance Spectroscopy, Molecular Weight, Peptides/*metabolism, Sphingomonas/*metabolism, Water Microbiology
• topic2: Phylogeny

Reference