Strain identifier

BacDive ID: 16067

Type strain: Yes

Species: Streptomyces venezuelae

Strain Designation: P.D. 04745 = Burkholder

Strain history: KCC S-0526 <-- IFO 13096 <-- SAJ <-- ISP 5230 <-- L. Anderson PD 04745 (A65).

NCBI tax ID(s): 953739 (strain), 54571 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 9391

BacDive-ID: 16067

DSM-Number: 40230

keywords: genome sequence, 16S sequence, Bacteria, spore-forming, mesophilic, antibiotic compound production

description: Streptomyces venezuelae P.D. 04745 = Burkholder is a spore-forming, mesophilic bacterium that produces antibiotic compounds and was isolated from tropical soil.

NCBI tax id

NCBI tax idMatching level
54571species
953739strain

strain history

@refhistory
9391<- E.B. Shirling, ISP <- L. Anderson, Park Davies & Co., PD 04745 <- P. R. Burkholder, A-65
67770KCC S-0526 <-- IFO 13096 <-- SAJ <-- ISP 5230 <-- L. Anderson PD 04745 (A65).

doi: 10.13145/bacdive16067.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces venezuelae
  • full scientific name: Streptomyces venezuelae Ehrlich et al. 1948 (Approved Lists 1980)

@ref: 9391

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces venezuelae

full scientific name: Streptomyces venezuelae Ehrlich et al. 1948 emend. Nouioui et al. 2018

strain designation: P.D. 04745 = Burkholder

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no93.91
69480100positive

multimedia

  • @ref: 9391
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40230.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9391GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9391ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperaturerange
9391positivegrowth28mesophilic
18563positiveoptimum30mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481yes100
69480yes100

compound production

@refcompound
9391chloramphenicol
9391jadomycin B
20216Chloramphenicol (Chloromycetin, Synthomycin, Levomycetin, Antibiotic 8-47)

halophily

  • @ref: 18563
  • salt: NaCl
  • growth: positive
  • tested relation: maximum
  • concentration: 2.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1856317234glucose+
1856322599arabinose+
1856317992sucrose-
1856318222xylose-
1856317268myo-inositol-
1856329864mannitol-
1856328757fructose+/-
1856326546rhamnose+/-
1856316634raffinose-
1856362968cellulose-
683685291gelatin+hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6777017698chloramphenicolyes
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGEL
18563+---++----+

Isolation, sampling and environmental information

isolation

  • @ref: 9391
  • sample type: tropical soil
  • geographic location: Caracas
  • country: Venezuela
  • origin.country: VEN
  • continent: Middle and South America

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Climate#Hot#Tropical

taxonmaps

  • @ref: 69479
  • File name: preview.99_490.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_403;99_490&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: AB045890
  • Sequence Identity:
  • Total samples: 9252
  • soil counts: 6254
  • aquatic counts: 336
  • animal counts: 471
  • plant counts: 2191

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
93911Risk group (German classification)
185631German classification

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces venezuelae ATCC 10712 strain ISP 5230 16S ribosomal RNA gene, partial sequenceAY9997391448ena953739
20218Streptomyces venezuelae gene for 16S rRNAAB0458901483ena54571
20218Streptomyces venezuelae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4526D44213120ena54571
20218Streptomyces venezuelae gene for 16S rRNA, partial sequence, strain: NBRC 12595AB1848361464ena54571
20218Streptomyces venezuelae gene for 16S rRNA, partial sequence, strain: NBRC 13096AB1843081469ena54571

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptomyces venezuelae ATCC 10712GCA_008639165completencbi953739
66792Streptomyces venezuelae ATCC 10712GCA_000253235chromosomencbi953739
66792Streptomyces venezuelae ATCC 10712953739.5completepatric953739
66792Streptomyces venezuelae ATCC 10712953739.44completepatric953739
66792Streptomyces venezuelae ISP52302582581599draftimg953739
66792Streptomyces venezuelae Shinobu 719, ATCC 107122524023215completeimg953739
66792Streptomyces venezuelae ISP 52302582581598draftimg953739
66792Streptomyces venezuelae ATCC 10712GCA_021432215contigncbi953739

GC content

  • @ref: 67770
  • GC-content: 72.5
  • method: genome sequence analysis

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes100no
motileno93.807no
flagellatedno96.874no
gram-positiveyes87.323no
anaerobicno99.389no
aerobicyes92.828no
halophileno95.135no
spore-formingyes93.481no
thermophileno99.042yes
glucose-utilyes90.827no
glucose-fermentno87.519no

External links

@ref: 9391

culture collection no.: DSM 40230, ATCC 10712, ATCC 25508, CBS 650.69, DSM 41109, ETH 26169, IFO 12595, IFO 13096, IMET 41356, IMRU 3534, IMRU 3625, ISP 5230, JCM 4526, KCC S-0526, NBRC 12595, NBRC 13096, NRRL B-2277, RIA 1288, VKM Ac-589, BCRC 11512, CGMCC 4.1526, LMG 19308, NRRL 2277, RIA 70

straininfo link

  • @ref: 85138
  • straininfo: 38564

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology2040427Molecular cloning of the genes for anthranilate synthetase from Streptomyces venezuelae ISP 5230.Paradkar AS, Stuttard C, Vining LCFEMS Microbiol Lett10.1016/0378-1097(91)90154-31991Anthranilate Synthase/*genetics/metabolism, Blotting, Southern, Cloning, Molecular, Escherichia coli/genetics, *Genes, Bacterial, Restriction Mapping, Streptomyces/enzymology/*genetics, Transformation, Bacterial, Tryptophan/geneticsMetabolism
Metabolism2324705Chloramphenicol resistance in Streptomyces: cloning and characterization of a chloramphenicol hydrolase gene from Streptomyces venezuelae.Mosher RH, Ranade NP, Schrempf H, Vining LCJ Gen Microbiol10.1099/00221287-136-2-2931990Amidohydrolases/*genetics, Blotting, Southern, Chloramphenicol/metabolism, Chloramphenicol Resistance/*genetics, *Cloning, Molecular, DNA, Bacterial, *Genes, Bacterial, Nucleic Acid Hybridization, Plasmids, Streptomyces/drug effects/*genetics/metabolismEnzymology
Pathogenicity2391493Sporulation of Streptomyces venezuelae in submerged cultures.Glazebrook MA, Doull JL, Stuttard C, Vining LCJ Gen Microbiol10.1099/00221287-136-3-5811990Adenosine/analogs & derivatives/pharmacology, Ammonium Sulfate/pharmacology, Anti-Bacterial Agents/*pharmacology, Carbon/pharmacology, Galactose/pharmacology, Mutation, Nitrogen/pharmacology, Spores, Bacterial/drug effects/physiology/ultrastructure, Streptomyces/drug effects/genetics/*physiology/ultrastructure
Metabolism2398345Plasmid transformation of Streptomyces venezuelae: modified procedures used to introduce the gene(s) for p-aminobenzoate synthase.Aidoo DA, Barrett K, Vining LCJ Gen Microbiol10.1099/00221287-136-4-65719904-Aminobenzoic Acid/metabolism, Chloramphenicol/metabolism, DNA, Bacterial/genetics, Genes, Bacterial, Mutation, Plasmids/*genetics, Protoplasts/metabolism, Restriction Mapping, Streptomyces/*genetics, Sucrose, Transaminases/*genetics, *Transformation, Bacterial
Enzymology2628543Purification, properties and immunological detection of a bromoperoxidase-catalase from Streptomyces venezuelae and from a chloramphenicol-nonproducing mutant.Knoch M, van Pee KH, Vining LC, Lingens FJ Gen Microbiol10.1099/00221287-135-9-24931989Catalase/immunology/*isolation & purification, Chemical Phenomena, Chemistry, Chloramphenicol/*metabolism, Chromatography, Agarose, Chromatography, Ion Exchange, Electrophoresis, Polyacrylamide Gel, Mutation, Peroxidases/immunology/*isolation & purification, Streptomyces/*enzymologyPhylogeny
Metabolism7592375Regulation of jadomycin B production in Streptomyces venezuelae ISP5230: involvement of a repressor gene, jadR2.Yang K, Han L, Vining LCJ Bacteriol10.1128/jb.177.21.6111-6117.19951995Amino Acid Sequence, Anti-Bacterial Agents/*metabolism, Bacterial Proteins/*genetics, Base Sequence, Chromosomes, Bacterial, Ethanol/pharmacology, Gene Expression Regulation, Bacterial, *Genes, Bacterial, Isoquinolines/metabolism, Molecular Sequence Data, Multienzyme Complexes/genetics, Mutagenesis, Repressor Proteins/*genetics, Restriction Mapping, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Streptomyces/drug effects/*genetics/metabolism, *Transcription FactorsGenetics
Metabolism7592948Inactivation of chloramphenicol by O-phosphorylation. A novel resistance mechanism in Streptomyces venezuelae ISP5230, a chloramphenicol producer.Mosher RH, Camp DJ, Yang K, Brown MP, Shaw WV, Vining LCJ Biol Chem10.1074/jbc.270.45.270001995Amino Acid Sequence, Anti-Bacterial Agents/*antagonists & inhibitors/chemistry/*metabolism, *Bacterial Proteins, Base Sequence, Chloramphenicol/*antagonists & inhibitors/chemistry/*metabolism, Cloning, Molecular, DNA, Bacterial/genetics, Drug Resistance, Microbial/genetics, Gene Expression, Molecular Sequence Data, Molecular Structure, Open Reading Frames, Phosphorylation, Phosphotransferases (Alcohol Group Acceptor)/genetics/metabolism, Sequence Homology, Amino Acid, Streptomyces/drug effects/genetics/*metabolismEnzymology
Metabolism7764672Conditions for the production of jadomycin B by Streptomyces venezuelae ISP5230: effects of heat shock, ethanol treatment and phage infection.Doull JL, Singh AK, Hoare M, Ayer SWJ Ind Microbiol10.1007/BF015841091994Anti-Bacterial Agents/*metabolism, *Bacteriophages, Culture Media/chemistry, Ethanol/*pharmacology, *Hot Temperature, Hydrogen-Ion Concentration, Isoquinolines/metabolism, Streptomyces/drug effects/*metabolism, Time FactorsStress
Enzymology7881555Cloning and characterization of polyketide synthase genes for jadomycin B biosynthesis in Streptomyces venezuelae ISP5230.Han L, Yang K, Ramalingam E, Mosher RH, Vining LCMicrobiology (Reading)10.1099/13500872-140-12-33791994Amino Acid Sequence, Anti-Bacterial Agents/*biosynthesis, Base Sequence, Cloning, Molecular, DNA, Bacterial/genetics, *Genes, Bacterial, Isoquinolines/metabolism, Molecular Sequence Data, Multienzyme Complexes/*genetics, Multigene Family, Nucleic Acid Hybridization, Open Reading Frames, Restriction Mapping, Sequence Homology, Amino Acid, Streptomyces/enzymology/*genetics/*metabolismMetabolism
Enzymology8013882Cloning and sequence analysis of a recA-like gene from Streptomyces venezuelae ISP5230.Yao W, Vining LCFEMS Microbiol Lett10.1111/j.1574-6968.1994.tb06802.x1994Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Bacterial/analysis, Escherichia coli/drug effects/genetics, Ethyl Methanesulfonate/pharmacology, Genes, Bacterial/*genetics, Molecular Sequence Data, Open Reading Frames/genetics, Rec A Recombinases/chemistry/*genetics, Restriction Mapping, Sequence Alignment, Sequence Analysis, DNA, Streptomyces/chemistry/*geneticsTranscriptome
Enzymology8515229Location of the genes for anthranilate synthase in Streptomyces venezuelae ISP5230: genetic mapping after integration of the cloned genes.Paradkar AS, Stuttard C, Vining LCJ Gen Microbiol10.1099/00221287-139-4-6871993Anthranilate Synthase/*genetics, Chromosome Mapping, Chromosomes, Bacterial, Cloning, Molecular, DNA, Bacterial/genetics, *Genes, Bacterial, Genetic Markers, Plasmids, Streptomyces/*enzymology/*genetics, Transduction, Genetic
Enzymology8704974A role for pabAB, a p-aminobenzoate synthase gene of Streptomyces venezuelae ISP5230, in chloramphenicol biosynthesis.Brown MP, Aidoo KA, Vining LCMicrobiology (Reading)10.1099/13500872-142-6-13451996Amino Acid Sequence, Bacterial Proteins/genetics/*physiology, Base Sequence, Candicidin/biosynthesis, Chloramphenicol/*biosynthesis, Chorismic Acid/metabolism, Chromosomes, Bacterial/genetics, Cloning, Molecular, Evolution, Molecular, *Genes, Bacterial, Molecular Sequence Data, Sequence Alignment, Sequence Homology, Amino Acid, Streptomyces/*enzymology/genetics, Transaminases/genetics/*physiology, Transformation, BacterialGenetics
Enzymology8868441Cloning, sequencing and disruption of a bromoperoxidase-catalase gene in Streptomyces venezuelae: evidence that it is not required for chlorination in chloramphenicol biosynthesis.Facey SJ, Gross F, Vining LC, Yang K, van Pe KHMicrobiology (Reading)10.1099/13500872-142-3-6571996Amino Acid Sequence, Base Sequence, Chloramphenicol/*metabolism, Cloning, Molecular, DNA, Fungal, Molecular Sequence Data, Mutation, Peroxidases/*genetics/metabolism, Sequence Alignment, Streptomyces/*genetics/metabolismMetabolism
Enzymology9695930Regulation of an anthranilate synthase gene in Streptomyces venezuelae by a trp attenuator.Lin C, Paradkar AS, Vining LCMicrobiology (Reading)10.1099/00221287-144-7-19711998Anthranilate Synthase/chemistry/*genetics/metabolism, Anticonvulsants/analysis, Base Sequence, Blotting, Southern, Cloning, Molecular, Escherichia coli/genetics, Gene Deletion, Genes, Bacterial/*genetics, Molecular Sequence Data, Open Reading Frames/genetics, Phenotype, Pseudomonas/genetics, Streptomyces/enzymology/*genetics, *Transformation, Genetic, Tryptophan/biosynthesis/genetics, ortho-Aminobenzoates/analysisGenetics
Enzymology10216290Cubic crystals of chloramphenicol phosphotransferase from Streptomyces venezuelae in complex with chloramphenicol.Ellis J, Campopiano DJ, Izard TActa Crystallogr D Biol Crystallogr10.1107/s09074449990030291999*Bacterial Proteins, Chloramphenicol/*chemistry, Crystallization, Crystallography, X-Ray, Escherichia coli/genetics/metabolism, Phosphotransferases (Alcohol Group Acceptor)/*chemistry/genetics/isolation & purification, Recombinant Proteins/chemistry, Streptomyces/*enzymologyMetabolism
Metabolism10784049An acyl-coenzyme A carboxylase encoding gene associated with jadomycin biosynthesis in Streptomyces venezuelae ISP5230.Han L, Yang K, Kulowski K, Wendt-Pienkowski E, Hutchinson CR, Vining LCMicrobiology (Reading)10.1099/00221287-146-4-9032000Amino Acid Sequence, Carbon-Carbon Ligases/*genetics/metabolism, Gene Expression Regulation, Bacterial, Isoquinolines/*metabolism, Molecular Sequence Data, Sequence Alignment, Streptomyces/*genetics/*metabolismGenetics
Enzymology11390684Cloning and functional analysis of a phosphopantetheinyl transferase superfamily gene associated with jadomycin biosynthesis in Streptomyces venezuelae ISP5230.Wang L, McVey J, Vining LCMicrobiology (Reading)10.1099/00221287-147-6-15352001Amino Acid Sequence, Blotting, Northern, Blotting, Southern, Cloning, Molecular, Electrophoresis, Polyacrylamide Gel, *Genes, Bacterial, Hydrogen-Ion Concentration, Isoquinolines/*metabolism, Molecular Sequence Data, Open Reading Frames, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Streptomyces/enzymology/*genetics/metabolism, Transferases (Other Substituted Phosphate Groups)/*genetics/metabolismMetabolism
Metabolism11495988The pdx genetic marker adjacent to the chloramphenicol biosynthesis gene cluster in Streptomyces venezuelae ISP5230: functional characterization.Magarvey N, He J, Aidoo KA, Vining LCMicrobiology (Reading)10.1099/00221287-147-8-21032001Amino Acid Sequence, Bacterial Proteins/chemistry/*genetics/metabolism, Chloramphenicol/*biosynthesis, Gene Deletion, Gene Expression Regulation, Bacterial, *Genes, Bacterial, *Genes, Regulator, Genetic Complementation Test, *Genetic Markers, Molecular Sequence Data, Multigene Family, Plasmids/genetics, Sequence Analysis, DNA, Streptomyces/*genetics/metabolism, Transformation, GeneticGenetics
Enzymology11495989p-Aminobenzoic acid and chloramphenicol biosynthesis in Streptomyces venezuelae: gene sets for a key enzyme, 4-amino-4-deoxychorismate synthase.Chang Z, Sun Y, He J, Vining LCMicrobiology (Reading)10.1099/00221287-147-8-211320014-Aminobenzoic Acid/*metabolism, Amino Acid Sequence, Carbon-Nitrogen Ligases, Chloramphenicol/*biosynthesis, Cloning, Molecular, Deoxyribonucleases, Type II Site-Specific/metabolism, Molecular Sequence Data, Sequence Alignment, Sequence Analysis, DNA, Streptomyces/*enzymology/genetics, Transaminases/chemistry/*genetics/*metabolismMetabolism
Metabolism11577160The gene cluster for chloramphenicol biosynthesis in Streptomyces venezuelae ISP5230 includes novel shikimate pathway homologues and a monomodular non-ribosomal peptide synthetase gene.He J, Magarvey N, Piraee M, Vining LCMicrobiology (Reading)10.1099/00221287-147-10-28172001Amino Acid Sequence, Bacterial Proteins/chemistry/*genetics, Carbon-Nitrogen Ligases, Chloramphenicol/*biosynthesis, Chromosome Walking, Cloning, Molecular, Gene Deletion, *Genes, Bacterial, Genetic Complementation Test, Molecular Sequence Data, Multigene Family, Mutation, Sequence Analysis, DNA, Shikimic Acid/*metabolism, Streptomyces/*genetics/metabolism, Transaminases/*genetics/metabolismEnzymology
Metabolism11733141A repressor-response regulator gene pair controlling jadomycin B production in Streptomyces venezuelae ISP5230.Yang K, Han L, He J, Wang L, Vining LCGene10.1016/s0378-1119(01)00723-52001Alleles, Amino Acid Sequence, Base Sequence, DNA, Bacterial/chemistry/genetics, Gene Dosage, Genes, Regulator/*genetics/physiology, Isoquinolines/*metabolism, Molecular Sequence Data, Mutation, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Streptomyces/*genetics/metabolismGenetics
Genetics11932454Biosynthesis of the dideoxysugar component of jadomycin B: genes in the jad cluster of Streptomyces venezuelae ISP5230 for L-digitoxose assembly and transfer to the angucycline aglycone.Wang L, White RL, Vining LCMicrobiology (Reading)10.1099/00221287-148-4-10912002Amino Acid Sequence, Anti-Bacterial Agents/*chemical synthesis, Chromosome Walking, Chromosomes, Fungal/*genetics, Cloning, Molecular, Conjugation, Genetic, Deoxy Sugars/*biosynthesis, Diploidy, Escherichia coli/genetics, Genetic Complementation Test, Genotype, Hexoses/*biosynthesis, Introns, Isoquinolines/*metabolism, Molecular Sequence Data, *Multigene Family, Phenotype, Promoter Regions, Genetic, Restriction Mapping, Sequence Alignment, Sequence Homology, Amino Acid, Streptomyces/*geneticsEnzymology
Genetics12080419Use of degenerate primers and touchdown PCR to amplify a halogenase gene fragment from Streptomyces venezuelae ISP5230.Piraee M, Vining LCJ Ind Microbiol Biotechnol10.1038/sj.jim.70002632002Amino Acid Sequence, Blotting, Southern, DNA Primers/*genetics, Genes, Bacterial/*genetics, Molecular Sequence Data, Oxidoreductases/chemistry/*genetics, Polymerase Chain Reaction/*methods, Sensitivity and Specificity, Sequence Homology, Amino Acid, Streptomyces/classification/enzymology/*geneticsEnzymology
Enzymology12101301Biosynthesis of sulfur-containing amino acids in Streptomyces venezuelae ISP5230: roles for cystathionine beta-synthase and transsulfuration.Chang Z, Vining LCMicrobiology (Reading)10.1099/00221287-148-7-21352002Amino Acid Sequence, Cloning, Molecular, Culture Media, Cystathionine beta-Synthase/*genetics/*metabolism, Cysteine/*biosynthesis, Cysteine Synthase/genetics/metabolism, Gene Deletion, Genetic Complementation Test, Methionine/biosynthesis, Molecular Sequence Data, Sequence Analysis, DNA, Serine/biosynthesis, Streptomyces/*enzymology/genetics/growth & development, Sulfur/*metabolismMetabolism
Metabolism12904539Control of growth, secondary metabolism and sporulation in Streptomyces venezuelae ISP5230 by jadW(1), a member of the afsA family of gamma-butyrolactone regulatory genes.Wang L, Vining LCMicrobiology (Reading)10.1099/mic.0.26209-020034-Butyrolactone/*metabolism, Amino Acid Sequence, Cloning, Molecular, DNA, Bacterial/genetics, Genes, Bacterial, Genes, Regulator, Genetic Complementation Test, Molecular Sequence Data, Multigene Family, Mutation, Phenotype, Receptors, GABA-A/genetics/metabolism, Sequence Homology, Amino Acid, Spores, Bacterial/physiology, Streptomyces/*genetics/*physiologyEnzymology
Enzymology14702400Biosynthesis of the dichloroacetyl component of chloramphenicol in Streptomyces venezuelae ISP5230: genes required for halogenation.Piraee M, White RL, Vining LCMicrobiology (Reading)10.1099/mic.0.26319-02004Amino Acid Sequence, Base Sequence, Chloramphenicol/*biosynthesis/chemistry, Cloning, Molecular, DNA, Bacterial/genetics, *Genes, Bacterial, Genetic Complementation Test, Halogens/metabolism, Molecular Sequence Data, Multigene Family, Mutation, Open Reading Frames, Oxidoreductases/genetics/metabolism, Phylogeny, Sequence Homology, Amino Acid, Streptomyces/*genetics/*metabolism, Transformation, GeneticMetabolism
Metabolism15070349The dynamic structure of jadomycin B and the amino acid incorporation step of its biosynthesis.Rix U, Zheng J, Remsing Rix LL, Greenwell L, Yang K, Rohr JJ Am Chem Soc10.1021/ja031724o2004Amino Acids/chemistry/*metabolism, Hydrogen Bonding, Isoleucine/chemistry/metabolism, Isoquinolines/chemistry/*metabolism, Models, Molecular, Molecular Conformation, Nuclear Magnetic Resonance, Biomolecular, Stereoisomerism
Enzymology15713404Novel jadomycins: incorporation of non-natural and natural amino acids.Jakeman DL, Farrell S, Young W, Doucet RJ, Timmons SCBioorg Med Chem Lett10.1016/j.bmcl.2004.12.0822005Amino Acids/*chemical synthesis/chemistry, Isoquinolines/*chemical synthesis/chemistry/isolation & purification, Molecular Conformation, Spectrometry, Mass, Electrospray Ionization/methods, Streptomyces/*chemistryPhylogeny
Metabolism15817470Functional analyses of oxygenases in jadomycin biosynthesis and identification of JadH as a bifunctional oxygenase/dehydrase.Chen YH, Wang CC, Greenwell L, Rix U, Hoffmeister D, Vining LC, Rohr J, Yang KQJ Biol Chem10.1074/jbc.M4142292002005Amino Acid Sequence, Blotting, Southern, Catalysis, Cell-Free System, Escherichia coli/metabolism, Genetic Techniques, Hydro-Lyases/chemistry/*physiology, Isoquinolines/chemistry/*metabolism, Models, Chemical, Models, Genetic, Molecular Sequence Data, Mutation, Oxygenases/chemistry/*physiology, Protein Binding, Protein Structure, Tertiary, Sequence Analysis, DNA, Species Specificity, Spectrophotometry, Streptomyces/metabolism, Streptomyces lividans/metabolismGenetics
Enzymology16185863Novel and expanded jadomycins incorporating non-proteogenic amino acids.Jakeman DL, Graham CL, Reid TRBioorg Med Chem Lett10.1016/j.bmcl.2005.08.0472005Amino Acids/*chemistry, Isoquinolines/*chemistry/isolation & purification, Molecular Structure, Oxazolone/chemistry, Spectrometry, Mass, Electrospray Ionization, Streptomyces/*metabolismPhylogeny
Metabolism16568271Culture conditions improving the production of jadomycin B.Jakeman DL, Graham CL, Young W, Vining LCJ Ind Microbiol Biotechnol10.1007/s10295-006-0113-42006Anti-Bacterial Agents/chemistry/metabolism, Bacteriological Techniques/*methods, Biotechnology/*methods, Chondroitin Sulfate Proteoglycans/metabolism, Culture Media/chemistry, Ethanol, Glucose/chemistry/metabolism, Isoquinolines/chemistry/metabolism, Molecular Structure, Morpholines/chemistry/metabolism, Naphthoquinones/chemistry/metabolism, Receptor-Like Protein Tyrosine Phosphatases, Class 5, Streptomyces/classification/*metabolismBiotechnology
Phylogeny17021937Streptomyces gulbargensis sp. nov., isolated from soil in Karnataka, India.Dastager SG, Li WJ, Agasar D, Sulochana MB, Tang SK, Tian XP, Zhi XYAntonie Van Leeuwenhoek10.1007/s10482-006-9099-12007Alkalies/pharmacology, Anti-Bacterial Agents/pharmacology, Bacterial Typing Techniques, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Genes, rRNA, Hot Temperature, Hydrogen-Ion Concentration, India, Microscopy, Electron, Scanning, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification/ultrastructure, TemperatureStress
Biotechnology17653711Engineering a regulatory region of jadomycin gene cluster to improve jadomycin B production in Streptomyces venezuelae.Zheng JT, Wang SL, Yang KQAppl Microbiol Biotechnol10.1007/s00253-007-1064-z2007Base Sequence, Blotting, Southern, DNA, Bacterial/chemistry/genetics, Genetic Engineering/*methods, Isoquinolines/metabolism, Molecular Sequence Data, *Multigene Family, Polymerase Chain Reaction, Promoter Regions, Genetic, Regulatory Sequences, Nucleic Acid/*genetics, Streptomyces/*genetics/*metabolism, Transformation, GeneticMetabolism
Pathogenicity19075054Antimicrobial activities of jadomycin B and structurally related analogues.Jakeman DL, Bandi S, Graham CL, Reid TR, Wentzell JR, Douglas SEAntimicrob Agents Chemother10.1128/AAC.00801-082008Anti-Bacterial Agents/chemistry/*pharmacology, Isoquinolines/chemistry/pharmacology, Methicillin-Resistant Staphylococcus aureus/drug effects, Microbial Sensitivity Tests, Molecular Structure, Staphylococcus epidermidis/drug effects, Streptomyces/*drug effects/genetics
Metabolism20112672[Evaluation of the activities of two promoters in Streptomycetes by reporter gene method].Li J, Xiang S, Yang X, Yang KWei Sheng Wu Xue Bao2009Bacterial Proteins/genetics/metabolism, Base Sequence, Drug Resistance, Bacterial, Gene Expression Regulation, Bacterial, *Genes, Reporter, Molecular Sequence Data, *Promoter Regions, Genetic, Streptomyces/*genetics/metabolismGenetics
Phylogeny21287404A method to type the potential angucycline producers in actinomycetes isolated from marine sponges.Ouyang Y, Wu H, Xie L, Wang G, Dai S, Chen M, Yang K, Li XAntonie Van Leeuwenhoek10.1007/s10482-011-9554-52011Actinobacteria/*enzymology/genetics/isolation & purification, Animals, Anti-Bacterial Agents/*biosynthesis, Benz(a)Anthracenes/*metabolism, Drug Discovery, Macrolides, Phylogeny, Polyketide Synthases/biosynthesis, Polymerase Chain Reaction, Porifera/*microbiology, Sequence Analysis, DNA, Streptomyces/classification/enzymology/metabolismEnzymology
Metabolism22050382Jadomycins derived from the assimilation and incorporation of norvaline and norleucine.Dupuis SN, Veinot T, Monro SM, Douglas SE, Syvitski RT, Goralski KB, McFarland SA, Jakeman DLJ Nat Prod10.1021/np200689w2011Amino Acid Sequence, Amino Acids/chemistry/metabolism, Chloramphenicol/metabolism, DNA/drug effects, Drug Screening Assays, Antitumor, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Isoquinolines/chemistry/metabolism, Microbial Sensitivity Tests, Molecular Structure, Norleucine/chemistry/*metabolism, Oxazolone/chemistry, Streptomyces/*chemistry/metabolism, Valine/*analogs & derivatives/chemistry/metabolismPathogenicity
Metabolism23650400The posttranslational modification cascade to the thiopeptide berninamycin generates linear forms and altered macrocyclic scaffolds.Malcolmson SJ, Young TS, Ruby JG, Skewes-Cox P, Walsh CTProc Natl Acad Sci U S A10.1073/pnas.13071111102013Amino Acid Sequence, Bacterial Proteins/chemistry/genetics/*metabolism, Macrocyclic Compounds/chemistry/*metabolism, Molecular Sequence Data, Peptides/chemistry/genetics/*metabolism, Peptides, Cyclic/chemistry/genetics/metabolism, Protein Precursors/chemistry/genetics/*metabolism, Protein Processing, Post-Translational, Protein Structure, Secondary, Streptomyces lividans/chemistry/genetics/*metabolism, Thiazoles/chemistry/metabolismGenetics
Metabolism24231527Jadomycins are cytotoxic to ABCB1-, ABCC1-, and ABCG2-overexpressing MCF7 breast cancer cells.Issa ME, Hall SR, Dupuis SN, Graham CL, Jakeman DL, Goralski KBAnticancer Drugs10.1097/CAD.00000000000000432014ATP Binding Cassette Transporter, Subfamily B, ATP Binding Cassette Transporter, Subfamily B, Member 1/*metabolism, ATP Binding Cassette Transporter, Subfamily G, Member 2, ATP-Binding Cassette Transporters/*metabolism, Antibiotics, Antineoplastic/*pharmacology, Aurora Kinase B/antagonists & inhibitors, Breast Neoplasms, Cell Survival/drug effects, Drug Resistance, Multiple, Drug Resistance, Neoplasm, Drug Screening Assays, Antitumor, Female, Humans, MCF-7 Cells, Multidrug Resistance-Associated Proteins/*metabolism, Neoplasm Proteins/*metabolism, Polyketides/chemistry/*pharmacologyPathogenicity
Metabolism25267678New insights into chloramphenicol biosynthesis in Streptomyces venezuelae ATCC 10712.Fernandez-Martinez LT, Borsetto C, Gomez-Escribano JP, Bibb MJ, Al-Bassam MM, Chandra G, Bibb MJAntimicrob Agents Chemother10.1128/AAC.04272-142014Acyl Carrier Protein/genetics/metabolism, Bacterial Proteins/*genetics/metabolism, Chloramphenicol/*biosynthesis, Gene Deletion, Gene Expression Profiling, *Gene Expression Regulation, Bacterial, Metabolic Networks and Pathways/*genetics, Microarray Analysis, Molecular Sequence Annotation, Multigene Family, Mutation, Sequence Analysis, DNA, Sodium-Hydrogen Exchangers/genetics/metabolism, Streptomyces/*genetics/metabolism, Transcription Factors/genetics/metabolism, Transcription, Genetic, Transferases (Other Substituted Phosphate Groups)/genetics/metabolismTranscriptome
Metabolism25554073Targeted activation of silent natural product biosynthesis pathways by reporter-guided mutant selection.Guo F, Xiang S, Li L, Wang B, Rajasarkka J, Grondahl-Yli-Hannuksela K, Ai G, Metsa-Ketela M, Yang KMetab Eng10.1016/j.ymben.2014.12.0062014Anthraquinones/metabolism, *Genes, Bacterial, *Genes, Reporter, Isoquinolines/metabolism, *Multigene Family, *Mutation, *Streptomyces/genetics/metabolism
Pathogenicity25692677Eight-membered ring-containing jadomycins: implications for non-enzymatic natural products biosynthesis.Robertson AW, Martinez-Farina CF, Smithen DA, Yin H, Monro S, Thompson A, McFarland SA, Syvitski RT, Jakeman DLJ Am Chem Soc10.1021/ja51146722015Acylation, Amino Acids, Neutral/chemistry, Antineoplastic Agents/chemistry/*pharmacology, Biological Products/chemical synthesis/*chemistry, Cell Line, Tumor/drug effects, Drug Screening Assays, Antitumor, Fermentation, Heterocyclic Compounds, 4 or More Rings/*chemistry/isolation & purification/metabolism, Humans, Magnetic Resonance Spectroscopy, Molecular Structure, Ornithine/chemistry, Streptomyces/growth & development/*metabolism, Structure-Activity Relationship, Tandem Mass SpectrometryMetabolism
Phylogeny26035093Isolation and Synthetic Diversification of Jadomycin 4-Amino-l-phenylalanine.Martinez-Farina CF, Robertson AW, Yin H, Monro S, McFarland SA, Syvitski RT, Jakeman DLJ Nat Prod10.1021/np50093982015Isoquinolines/chemical synthesis/*chemistry, Molecular Structure, Naphthoquinones/chemical synthesis/*chemistry, Nuclear Magnetic Resonance, Biomolecular, Oxazolone/chemistry, Phenylalanine/*analogs & derivatives/chemical synthesis/chemistry, Streptomyces/*chemistry/growth & development
Enzymology26203536Characterization of l-Digitoxosyl-phenanthroviridin from Streptomyces venezuelae ISP5230.Robertson AW, Martinez-Farina CF, Syvitski RT, Jakeman DLJ Nat Prod10.1021/acs.jnatprod.5b002772015Anti-Bacterial Agents/chemistry, Benzophenanthridines/chemistry/*isolation & purification, Drug Screening Assays, Antitumor, Humans, Isoquinolines/chemistry/*isolation & purification, Lysine/metabolism, Molecular Structure, National Cancer Institute (U.S.), Nuclear Magnetic Resonance, Biomolecular, Streptomyces/*chemistry, Structure-Activity Relationship, Tandem Mass Spectrometry, United StatesPhylogeny
26469060A method for investigating the stereochemical course of terpene cyclisations.Rabe P, Rinkel J, Klapschinski TA, Barra L, Dickschat JSOrg Biomol Chem10.1039/c5ob01998b2016Cyclization, Molecular Conformation, Stereoisomerism, Terpenes/*chemistry
Genetics26515616Genome-wide identification and evaluation of constitutive promoters in streptomycetes.Li S, Wang J, Li X, Yin S, Wang W, Yang KMicrob Cell Fact10.1186/s12934-015-0351-02015Gene Expression Regulation, Bacterial/*genetics, Genome-Wide Association Study/*methods, Metabolic Engineering/*methods, Promoter Regions, Genetic/*genetics, Streptomyces/*genetics
Metabolism26715388Improvement of chloramphenicol production in Streptomyces venezuelae ATCC 10712 by overexpression of the aroB and aroK genes catalysing steps in the shikimate pathway.Vitayakritsirikul V, Jaemsaeng R, Lohmaneeratana K, Thanapipatsiri A, Daduang R, Chuawong P, Thamchaipenet AAntonie Van Leeuwenhoek10.1007/s10482-015-0640-y2015Catalysis, Chloramphenicol/*biosynthesis, *Gene Expression, Gene Expression Regulation, Enzymologic, Gene Expression Regulation, Fungal, Metabolic Networks and Pathways, Phosphotransferases (Alcohol Group Acceptor)/*genetics, Shikimic Acid/*metabolism, Streptomyces/*genetics/*metabolism, Transcription, GeneticBiotechnology
Metabolism26814718JadX is a Disparate Natural Product Binding Protein.Robertson AW, Forget SM, Martinez-Farina CF, McCormick NE, Syvitski RT, Jakeman DLJ Am Chem Soc10.1021/jacs.5b112862016Biological Products/chemistry/*metabolism, Carrier Proteins/chemistry/genetics/*metabolism, Chloramphenicol/chemistry/metabolism, Isoquinolines/chemistry/metabolism, Molecular Conformation, Nuclear Magnetic Resonance, Biomolecular, Recombinant Proteins/chemistry/metabolism, Streptomyces/chemistry/*metabolism
Genetics26893416Genome Sequences of Streptomyces Phages Amela and Verse.Layton SR, Hemenway RM, Munyoki CM, Barnes EB, Barnett SE, Bond AM, Narvaez JM, Sirisakd CD, Smith BR, Swain J, Syed O, Bowman CA, Russell DA, Bhuiyan S, Donegan-Quick R, Benjamin RC, Hughes LEGenome Announc10.1128/genomeA.01589-152016
Metabolism27206520Activation of chloramphenicol biosynthesis in Streptomyces venezuelae ATCC 10712 by ethanol shock: insights from the promoter fusion studies.Sekurova ON, Zhang J, Kristiansen KA, Zotchev SBMicrob Cell Fact10.1186/s12934-016-0484-92016Bacterial Proteins/genetics/metabolism, Chloramphenicol/*biosynthesis/chemistry, Ethanol/*pharmacology, Gene Expression Regulation, Bacterial/*drug effects, Genes, Reporter, Genotype, Multigene Family, Plasmids/genetics/metabolism, Promoter Regions, Genetic/*genetics, Repressor Proteins/genetics/metabolism, Streptomyces/genetics/growth & development/*metabolismGenetics
28377749Streptomyces venezuelae ISP5230 Maintains Excretion of Jadomycin upon Disruption of the MFS Transporter JadL Located within the Natural Product Biosynthetic Gene Cluster.Forget SM, McVey J, Vining LC, Jakeman DLFront Microbiol10.3389/fmicb.2017.004322017
Pathogenicity28520425Furan and Lactam Jadomycin Biosynthetic Congeners Isolated from Streptomyces venezuelae ISP5230 Cultured with Nepsilon-Trifluoroacetyl-l-lysine.Forget SM, Robertson AW, Overy DP, Kerr RG, Jakeman DLJ Nat Prod10.1021/acs.jnatprod.7b001522017Amino Acid Sequence, Anti-Bacterial Agents/*chemistry, Cyclization, Furans/*chemistry, Gram-Positive Bacteria, Isoquinolines/*chemistry, Lactams/*chemistry, Lysine/*analogs & derivatives/chemistry/metabolism, Methicillin-Resistant Staphylococcus aureus/drug effects, Molecular Structure, Naphthoquinones/*chemistry, Pseudomonas aeruginosa/drug effects, Streptomyces/*chemistryPhylogeny
Metabolism28539332Identification and characterization of two types of amino acid-regulated acetyltransferases in actinobacteria.Lu YX, Liu XX, Liu WB, Ye BCBiosci Rep10.1042/BSR201701572017Acetyltransferases/genetics/*metabolism, Asparagine/genetics/*metabolism, Bacterial Proteins/genetics/*metabolism, Cysteine/genetics/*metabolism, Protein Processing, Post-Translational/*physiology, Streptomyces/*enzymology/geneticsEnzymology
28553520Watasemycin biosynthesis in Streptomyces venezuelae: thiazoline C-methylation by a type B radical-SAM methylase homologue.Inahashi Y, Zhou S, Bibb MJ, Song L, Al-Bassam MM, Bibb MJ, Challis GLChem Sci10.1039/c6sc03533g2017
29301868Protein acetylation: an important mechanism in actinobacteria.Zhang H, Xu XBiosci Rep10.1042/BSR201708512018Acetylation, *Actinobacteria, Amino Acid Sequence, Cysteine/genetics, Lysine, *Protein Processing, Post-Translational
Metabolism30718781Modulation of salt tolerance in Thai jasmine rice (Oryza sativa L. cv. KDML105) by Streptomyces venezuelae ATCC 10712 expressing ACC deaminase.Yoolong S, Kruasuwan W, Thanh Pham HT, Jaemsaeng R, Jantasuriyarat C, Thamchaipenet ASci Rep10.1038/s41598-018-37987-52019Bacterial Proteins/*biosynthesis, Carbon-Carbon Lyases/*biosynthesis, *Oryza/metabolism/microbiology, *Salt Tolerance, Streptomyces/*metabolism
Metabolism30721456Growth and differentiation properties of pikromycin-producing Streptomyces venezuelae ATCC15439.Kim JE, Choi JS, Roe JHJ Microbiol10.1007/s12275-019-8539-32019Cell Wall/physiology, Chloramphenicol/biosynthesis, Gene Expression Profiling, Macrolides/*metabolism, Secondary Metabolism/physiology, Spores, Bacterial/*growth & development, Streptomyces/cytology/*growth & development/*metabolism, Transcriptome/geneticsTranscriptome
Metabolism31429289On the Catalytic Activity of a GT1 Family Glycosyltransferase from Streptomyces venezuelae ISP5230.Forget SM, Shepard SB, Soleimani E, Jakeman DLJ Org Chem10.1021/acs.joc.9b011302019Amino Acid Sequence, Biocatalysis, Glycosides/biosynthesis/chemistry, Glycosylation, Glycosyltransferases/chemistry/genetics/*metabolism, Molecular Structure, Polyphenols/chemistry/metabolism, Recombinant Proteins/chemistry/genetics/*metabolism, Streptomyces/*enzymology/genetics, Substrate SpecificityEnzymology
Genetics32516997Comparative Genomics Determines Strain-Dependent Secondary Metabolite Production in Streptomyces venezuelae Strains.Kim W, Lee N, Hwang S, Lee Y, Kim J, Cho S, Palsson B, Cho BKBiomolecules10.3390/biom100608642020Chloramphenicol/*biosynthesis/chemistry/metabolism, *Genomics, Isoquinolines/chemistry/*metabolism, Molecular Structure, Streptomyces/chemistry/*classification/genetics/*metabolismMetabolism
Metabolism33400639Influence of core divisome proteins on cell division in Streptomyces venezuelae ATCC 10712.Cantlay S, Sen BC, Flardh K, McCormick JRMicrobiology (Reading)10.1099/mic.0.0010152021Bacterial Proteins/genetics/*metabolism, *Cell Division/genetics, Chromosome Segregation, Cytoskeletal Proteins/genetics/metabolism, Membrane Proteins/genetics/metabolism, Mutation, Phenotype, Promoter Regions, Genetic, Spores, Bacterial/cytology/genetics/physiology, Streptomyces/*cytology/genetics/physiologyPhenotype
Genetics34100946Streptomyces venezuelae NRRL B-65442: genome sequence of a model strain used to study morphological differentiation in filamentous actinobacteria.Gomez-Escribano JP, Holmes NA, Schlimpert S, Bibb MJ, Chandra G, Wilkinson B, Buttner MJ, Bibb MJJ Ind Microbiol Biotechnol10.1093/jimb/kuab0352021DNA, Bacterial/genetics, *Genome, Bacterial, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Streptomyces/cytology/geneticsPhylogeny
Biotechnology34570109A High-Yield Streptomyces Transcription-Translation Toolkit for Synthetic Biology and Natural Product Applications.Toh M, Chengan K, Hanson T, Freemont PS, Moore SJJ Vis Exp10.3791/630122021*Biological Products, Plasmids, *Streptomyces/genetics, Synthetic Biology
Pathogenicity34708587Jadomycins: A potential chemotherapy for multi-drug resistant metastatic breast cancer.Bonitto EP, McKeown BT, Goralski KBPharmacol Res Perspect10.1002/prp2.8862021Animals, Antineoplastic Agents/*pharmacology, Breast Neoplasms/*drug therapy, Drug Resistance, Multiple, Drug Resistance, Neoplasm, Female, Humans, Isoquinolines/*pharmacology, Naphthoquinones/pharmacology, Streptomyces/metabolismMetabolism
Enzymology35985040Pilot study of jadomycin B pharmacokinetics and anti-tumoral effects in zebrafish larvae and mouse breast cancer xenograft models.McKeown BT, Relja NJ, Hall SR, Gebremeskel S, MacLeod JM, Veinotte CJ, Bennett LG, Ohlund LB, Sleno L, Jakeman DL, Berman JN, Johnston B, Goralski KBCan J Physiol Pharmacol10.1139/cjpp-2022-01522022

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