Name: Streptomyces venezuelae P.D. 04745 = Burkholder
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16067

Type strain:

Species: Streptomyces venezuelae

Strain Designation: P.D. 04745 = Burkholder

Culture col. no.: DSM 40230, ATCC 10712, ATCC 25508, CBS 650.69, DSM 41109, ETH 26169, IFO 12595, IFO 13096, IMET 41356, IMRU 3534, IMRU 3625, ISP 5230, JCM 4526, KCC S-0526, NBRC 12595, NBRC 13096, NRRL B-2277, RIA 1288, VKM Ac-589, BCRC 11512, CGMCC 4.1526, LMG 19308, NRRL 2277, RIA 70

Strain history: KCC S-0526 <-- IFO 13096 <-- SAJ <-- ISP 5230 <-- L. Anderson PD 04745 (A65).

NCBI tax ID(s): 953739 (strain), 54571 (species)

SI-ID 38564

LMG 19308, ATCC 10712, ATCC 25508, CCRC 11512, DSM 40230, DSM 41109, IFO 12595, IFO 13096, IMET 41356, JCM 4526, NRRL B-2277, VKM Ac-589, CBS 650.69, AS 4.1516, NBRC 12595, NBRC 13096, BCRC 11512, CGMCC 4.1526, AS4.1307, AS 4.1526

Other strains from Streptomyces venezuelae

S. venezuelae 8-44, FD 16317, DSM 40634, ATCC ...
S. venezuelae C 448, DSM 40612, CCM 3198, JCM ...
S. venezuelae Tü 1102, DSM 40727
S. venezuelae WC 3629, DSM 41111, ATCC 15068, ...
S. venezuelae ST032547(HKI),
S. venezuelae ST033286(HKI),
S. venezuelae ST021604(HKI), F092, P216, DoHKI73, ...
S. venezuelae ST002391(HKI), F056, BI 09901, ...
S. venezuelae JIC_Sven, DSM 112328, NRRL B-65442
S. venezuelae JCM 4088

Section

Streptomyces venezuelae P.D. 04745 = Burkholder is a spore-forming, mesophilic bacterium that produces antibiotic compounds and was isolated from tropical soil.

antibiotic compound production
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces venezuelae**
	Full Scientific Name (LPSN)	Streptomyces venezuelae Ehrlich et al. 1948 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %93.91

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9391]	growth	28 °C
[Ref.: #18563]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #9391]	Temperature range	mesophilic
[Ref.: #18563]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9391]	Name of produced compound	chloramphenicol
[Ref.: #9391]	Name of produced compound	jadomycin B
[Ref.: #20216]	Name of produced compound	Chloramphenicol (Chloromycetin, Synthomycin, Levomycetin, Antibiotic 8-47)

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18563]		NaCl		maximum	2.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18563]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18563]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #18563]	fructose ChEBI	+/-
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18563]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #18563]	mannitol ChEBI	-
[Ref.: #18563]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18563]	raffinose ChEBI	-
[Ref.: #18563]	rhamnose ChEBI	+/-
[Ref.: #18563]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18563]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #67770]	chloramphenicol ChEBI	yes
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	yes	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18563]	122	+	-	-	-	+	+	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	enterobactin biosynthesis	100	3 of 3
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	dTDPLrhamnose biosynthesis	100	8 of 8
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	molybdenum cofactor biosynthesis	100	9 of 9
[Ref.: #66794]	metabolism of amino sugars and derivatives	100	5 of 5
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	taurine degradation	100	1 of 1
[Ref.: #66794]	lipoate biosynthesis	100	5 of 5
[Ref.: #66794]	grixazone biosynthesis	100	2 of 2
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	glycolate and glyoxylate degradation	100	6 of 6
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	chorismate metabolism	100	9 of 9
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	CO2 fixation in Crenarchaeota	100	9 of 9
[Ref.: #66794]	glycine betaine biosynthesis	100	5 of 5
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	1,4-dihydroxy-6-naphthoate biosynthesis	100	6 of 6
[Ref.: #66794]	isoleucine metabolism	100	8 of 8
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	NAD metabolism	94.44	17 of 18
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	92.86	26 of 28
[Ref.: #66794]	citric acid cycle	92.86	13 of 14
[Ref.: #66794]	phenylalanine metabolism	92.31	12 of 13
[Ref.: #66794]	leucine metabolism	92.31	12 of 13
[Ref.: #66794]	proline metabolism	90.91	10 of 11
[Ref.: #66794]	myo-inositol biosynthesis	90	9 of 10
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	propionate fermentation	90	9 of 10
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	gluconeogenesis	87.5	7 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	alanine metabolism	86.21	25 of 29
[Ref.: #66794]	glutathione metabolism	85.71	12 of 14
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	propanol degradation	85.71	6 of 7
[Ref.: #66794]	vitamin B12 metabolism	85.29	29 of 34
[Ref.: #66794]	urea cycle	84.62	11 of 13
[Ref.: #66794]	metabolism of disaccharids	81.82	9 of 11
[Ref.: #66794]	purine metabolism	80.85	76 of 94
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	arginine metabolism	79.17	19 of 24
[Ref.: #66794]	tryptophan metabolism	78.95	30 of 38
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	allantoin degradation	77.78	7 of 9
[Ref.: #66794]	glycolysis	76.47	13 of 17
[Ref.: #66794]	non-pathway related	76.32	29 of 38
[Ref.: #66794]	pyrimidine metabolism	75.56	34 of 45
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	cyclohexanol degradation	75	3 of 4
[Ref.: #66794]	degradation of pentoses	75	21 of 28
[Ref.: #66794]	lipid metabolism	74.19	23 of 31
[Ref.: #66794]	isoprenoid biosynthesis	73.08	19 of 26
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	d-xylose degradation	72.73	8 of 11
[Ref.: #66794]	histidine metabolism	72.41	21 of 29
[Ref.: #66794]	cysteine metabolism	72.22	13 of 18
[Ref.: #66794]	degradation of hexoses	72.22	13 of 18
[Ref.: #66794]	tyrosine metabolism	71.43	10 of 14
[Ref.: #66794]	aclacinomycin biosynthesis	71.43	5 of 7
[Ref.: #66794]	oxidative phosphorylation	70.33	64 of 91
[Ref.: #66794]	4-hydroxyphenylacetate degradation	70	7 of 10
[Ref.: #66794]	vitamin B1 metabolism	69.23	9 of 13
[Ref.: #66794]	degradation of sugar alcohols	68.75	11 of 16
[Ref.: #66794]	degradation of sugar acids	68	17 of 25
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
[Ref.: #66794]	4-hydroxymandelate degradation	66.67	6 of 9
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	IAA biosynthesis	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	phenol degradation	65	13 of 20
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	androgen and estrogen metabolism	62.5	10 of 16
[Ref.: #66794]	lysine metabolism	61.9	26 of 42
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	bacilysin biosynthesis	60	3 of 5
[Ref.: #66794]	3-phenylpropionate degradation	60	9 of 15
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	arachidonate biosynthesis	60	3 of 5
[Ref.: #66794]	ascorbate metabolism	59.09	13 of 22
[Ref.: #66794]	daunorubicin biosynthesis	55.56	5 of 9
[Ref.: #66794]	nitrate assimilation	55.56	5 of 9
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	toluene degradation	50	2 of 4
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	alginate biosynthesis	50	2 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	vitamin E metabolism	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	polyamine pathway	47.83	11 of 23
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	47.06	8 of 17
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	carotenoid biosynthesis	45.45	10 of 22
[Ref.: #66794]	cholesterol biosynthesis	45.45	5 of 11
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	benzoyl-CoA degradation	42.86	3 of 7
[Ref.: #66794]	vitamin K metabolism	40	2 of 5
[Ref.: #66794]	creatinine degradation	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	elloramycin biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	phenylpropanoid biosynthesis	38.46	5 of 13
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	methane metabolism	33.33	1 of 3
[Ref.: #66794]	chlorophyll metabolism	33.33	6 of 18
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	30.77	4 of 13
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9391]	Sample type/isolated from	tropical soil
[Ref.: #9391]	Geographic location (country and/or sea, region)	Caracas
[Ref.: #9391]	Country	Venezuela
[Ref.: #9391]	Country ISO 3 Code	VEN
[Ref.: #9391]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Climate	#Hot	#Tropical

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB045890 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	336
Soil Samples	6254
Animal Samples	471
Plant Samples	2191
Total Samples	9252

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18563]	Biosafety level	1	German classification
[Ref.: #9391]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces venezuelae ATCC 10712 strain ISP 5230 16S ribosomal RNA gene, partial sequence	AY999739	1448	ENA	953739 tax ID	*
[Ref.: #20218]	Streptomyces venezuelae gene for 16S rRNA	AB045890	1483	ENA	54571 tax ID	*
[Ref.: #20218]	Streptomyces venezuelae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4526	D44213	120	ENA	54571 tax ID	*
[Ref.: #20218]	Streptomyces venezuelae gene for 16S rRNA, partial sequence, strain: NBRC 12595	AB184836	1464	ENA	54571 tax ID	*
[Ref.: #20218]	Streptomyces venezuelae gene for 16S rRNA, partial sequence, strain: NBRC 13096	AB184308	1469	ENA	54571 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces venezuelae ATCC 10712	GCA_021432215	contig	GenBank	953739 tax ID	*
[Ref.: #66792]	Streptomyces venezuelae ATCC 10712	GCA_000253235	chromosome	GenBank	953739 tax ID	*
[Ref.: #66792]	Streptomyces venezuelae ATCC 10712	953739.5	complete	PATRIC	953739 tax ID	*
[Ref.: #66792]	Streptomyces venezuelae ATCC 10712	953739.44	complete	PATRIC	953739 tax ID	*
[Ref.: #66792]	Streptomyces venezuelae ISP5230	2582581599	draft	JGI IMG/M	953739 tax ID	*
[Ref.: #66792]	Streptomyces venezuelae Shinobu 719, ATCC 10712	2524023215	complete	JGI IMG/M	953739 tax ID	*

[Ref.: #67770]

GC-content

72.5 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces venezuelae ATCC 10712 ATCC 10712 NCBI: GCA_008639165.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces venezuelae ATCC 10712 ATCC 10712 NCBI: GCA_008639165.1
[Ref.: #69480]	motile	no	93.807	no
[Ref.: #69480]	flagellated	no	96.874	no
[Ref.: #69480]	gram-positive	yes	87.323	no
[Ref.: #69480]	anaerobic	no	99.389	no
[Ref.: #69480]	aerobic	yes	92.828	no
[Ref.: #69480]	halophile	no	95.135	no
[Ref.: #69480]	spore-forming	yes	93.481	no
[Ref.: #69480]	thermophile	no	99.042	yes
[Ref.: #69480]	glucose-util	yes	90.827	no
[Ref.: #69480]	glucose-ferment	no	87.519	no

Availability in culture collections External links

[Ref.: #9391]

Culture collection no.

DSM 40230, ATCC 10712, ATCC 25508, CBS 650.69, DSM 41109, ETH 26169, IFO 12595, IFO 13096, IMET 41356, IMRU 3534, IMRU 3625, ISP 5230, JCM 4526, KCC S-0526, NBRC 12595, NBRC 13096, NRRL B-2277, RIA 1288, VKM Ac-589, BCRC 11512, CGMCC 4.1526, LMG 19308, NRRL 2277, RIA 70

[Ref.: #85138]

SI-ID 38564

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Metabolism	Identification and characterization of two types of amino acid-regulated acetyltransferases in actinobacteria.	Lu YX, Liu XX, Liu WB, Ye BC	Biosci Rep	10.1042/BSR20170157	2017	*
Pathogenicity	Antimicrobial activities of jadomycin B and structurally related analogues.	Jakeman DL, Bandi S, Graham CL, Reid TR, Wentzell JR, Douglas SE	Antimicrob Agents Chemother	10.1128/AAC.00801-08	2008	*
Metabolism	Inactivation of chloramphenicol by O-phosphorylation. A novel resistance mechanism in Streptomyces venezuelae ISP5230, a chloramphenicol producer.	Mosher RH, Camp DJ, Yang K, Brown MP, Shaw WV, Vining LC	J Biol Chem	10.1074/jbc.270.45.27000	1995	*
Enzymology	Cloning and sequence analysis of a recA-like gene from Streptomyces venezuelae ISP5230.	Yao W, Vining LC	FEMS Microbiol Lett	10.1111/j.1574-6968.1994.tb06802.x	1994	*
Pathogenicity	Jadomycins: A potential chemotherapy for multi-drug resistant metastatic breast cancer.	Bonitto EP, McKeown BT, Goralski KB	Pharmacol Res Perspect	10.1002/prp2.886	2021	*
Biotechnology	A High-Yield Streptomyces Transcription-Translation Toolkit for Synthetic Biology and Natural Product Applications.	Toh M, Chengan K, Hanson T, Freemont PS, Moore SJ	J Vis Exp	10.3791/63012	2021	*
Genetics	Streptomyces venezuelae NRRL B-65442: genome sequence of a model strain used to study morphological differentiation in filamentous actinobacteria.	Gomez-Escribano JP, Holmes NA, Schlimpert S, Bibb MJ, Chandra G, Wilkinson B, Buttner MJ, Bibb MJ	J Ind Microbiol Biotechnol	10.1093/jimb/kuab035	2021	*
Metabolism	Influence of core divisome proteins on cell division in Streptomyces venezuelae ATCC 10712.	Cantlay S, Sen BC, Flardh K, McCormick JR	Microbiology (Reading)	10.1099/mic.0.001015	2021	*
Genetics	Comparative Genomics Determines Strain-Dependent Secondary Metabolite Production in Streptomyces venezuelae Strains.	Kim W, Lee N, Hwang S, Lee Y, Kim J, Cho S, Palsson B, Cho BK	Biomolecules	10.3390/biom10060864	2020	*
Metabolism	On the Catalytic Activity of a GT1 Family Glycosyltransferase from Streptomyces venezuelae ISP5230.	Forget SM, Shepard SB, Soleimani E, Jakeman DL	J Org Chem	10.1021/acs.joc.9b01130	2019	*
Metabolism	Growth and differentiation properties of pikromycin-producing Streptomyces venezuelae ATCC15439.	Kim JE, Choi JS, Roe JH	J Microbiol	10.1007/s12275-019-8539-3	2019	*
Metabolism	Modulation of salt tolerance in Thai jasmine rice (Oryza sativa L. cv. KDML105) by Streptomyces venezuelae ATCC 10712 expressing ACC deaminase.	Yoolong S, Kruasuwan W, Thanh Pham HT, Jaemsaeng R, Jantasuriyarat C, Thamchaipenet A	Sci Rep	10.1038/s41598-018-37987-5	2019	*
Pathogenicity	Furan and Lactam Jadomycin Biosynthetic Congeners Isolated from Streptomyces venezuelae ISP5230 Cultured with Nepsilon-Trifluoroacetyl-l-lysine.	Forget SM, Robertson AW, Overy DP, Kerr RG, Jakeman DL	J Nat Prod	10.1021/acs.jnatprod.7b00152	2017	*
Metabolism	Activation of chloramphenicol biosynthesis in Streptomyces venezuelae ATCC 10712 by ethanol shock: insights from the promoter fusion studies.	Sekurova ON, Zhang J, Kristiansen KA, Zotchev SB	Microb Cell Fact	10.1186/s12934-016-0484-9	2016	*
Genetics	Genome Sequences of Streptomyces Phages Amela and Verse.	Layton SR, Hemenway RM, Munyoki CM, Barnes EB, Barnett SE, Bond AM, Narvaez JM, Sirisakd CD, Smith BR, Swain J, Syed O, Bowman CA, Russell DA, Bhuiyan S, Donegan-Quick R, Benjamin RC, Hughes LE	Genome Announc	10.1128/genomeA.01589-15	2016	*
Metabolism	JadX is a Disparate Natural Product Binding Protein.	Robertson AW, Forget SM, Martinez-Farina CF, McCormick NE, Syvitski RT, Jakeman DL	J Am Chem Soc	10.1021/jacs.5b11286	2016	*
Metabolism	Improvement of chloramphenicol production in Streptomyces venezuelae ATCC 10712 by overexpression of the aroB and aroK genes catalysing steps in the shikimate pathway.	Vitayakritsirikul V, Jaemsaeng R, Lohmaneeratana K, Thanapipatsiri A, Daduang R, Chuawong P, Thamchaipenet A	Antonie Van Leeuwenhoek	10.1007/s10482-015-0640-y	2015	*
Genetics	Genome-wide identification and evaluation of constitutive promoters in streptomycetes.	Li S, Wang J, Li X, Yin S, Wang W, Yang K	Microb Cell Fact	10.1186/s12934-015-0351-0	2015	*
Enzymology	Characterization of l-Digitoxosyl-phenanthroviridin from Streptomyces venezuelae ISP5230.	Robertson AW, Martinez-Farina CF, Syvitski RT, Jakeman DL	J Nat Prod	10.1021/acs.jnatprod.5b00277	2015	*
Phylogeny	Isolation and Synthetic Diversification of Jadomycin 4-Amino-l-phenylalanine.	Martinez-Farina CF, Robertson AW, Yin H, Monro S, McFarland SA, Syvitski RT, Jakeman DL	J Nat Prod	10.1021/np5009398	2015	*
Pathogenicity	Eight-membered ring-containing jadomycins: implications for non-enzymatic natural products biosynthesis.	Robertson AW, Martinez-Farina CF, Smithen DA, Yin H, Monro S, Thompson A, McFarland SA, Syvitski RT, Jakeman DL	J Am Chem Soc	10.1021/ja5114672	2015	*
Metabolism	Targeted activation of silent natural product biosynthesis pathways by reporter-guided mutant selection.	Guo F, Xiang S, Li L, Wang B, Rajasarkka J, Grondahl-Yli-Hannuksela K, Ai G, Metsa-Ketela M, Yang K	Metab Eng	10.1016/j.ymben.2014.12.006	2014	*
Metabolism	New insights into chloramphenicol biosynthesis in Streptomyces venezuelae ATCC 10712.	Fernandez-Martinez LT, Borsetto C, Gomez-Escribano JP, Bibb MJ, Al-Bassam MM, Chandra G, Bibb MJ	Antimicrob Agents Chemother	10.1128/AAC.04272-14	2014	*
Metabolism	Jadomycins are cytotoxic to ABCB1-, ABCC1-, and ABCG2-overexpressing MCF7 breast cancer cells.	Issa ME, Hall SR, Dupuis SN, Graham CL, Jakeman DL, Goralski KB	Anticancer Drugs	10.1097/CAD.0000000000000043	2014	*
Metabolism	The posttranslational modification cascade to the thiopeptide berninamycin generates linear forms and altered macrocyclic scaffolds.	Malcolmson SJ, Young TS, Ruby JG, Skewes-Cox P, Walsh CT	Proc Natl Acad Sci U S A	10.1073/pnas.1307111110	2013	*
Metabolism	Jadomycins derived from the assimilation and incorporation of norvaline and norleucine.	Dupuis SN, Veinot T, Monro SM, Douglas SE, Syvitski RT, Goralski KB, McFarland SA, Jakeman DL	J Nat Prod	10.1021/np200689w	2011	*
Phylogeny	A method to type the potential angucycline producers in actinomycetes isolated from marine sponges.	Ouyang Y, Wu H, Xie L, Wang G, Dai S, Chen M, Yang K, Li X	Antonie Van Leeuwenhoek	10.1007/s10482-011-9554-5	2011	*
Metabolism	[Evaluation of the activities of two promoters in Streptomycetes by reporter gene method].	Li J, Xiang S, Yang X, Yang K	Wei Sheng Wu Xue Bao		2009	*
Biotechnology	Engineering a regulatory region of jadomycin gene cluster to improve jadomycin B production in Streptomyces venezuelae.	Zheng JT, Wang SL, Yang KQ	Appl Microbiol Biotechnol	10.1007/s00253-007-1064-z	2007	*
Phylogeny	Streptomyces gulbargensis sp. nov., isolated from soil in Karnataka, India.	Dastager SG, Li WJ, Agasar D, Sulochana MB, Tang SK, Tian XP, Zhi XY	Antonie Van Leeuwenhoek	10.1007/s10482-006-9099-1	2007	*
Metabolism	Culture conditions improving the production of jadomycin B.	Jakeman DL, Graham CL, Young W, Vining LC	J Ind Microbiol Biotechnol	10.1007/s10295-006-0113-4	2006	*
Enzymology	Novel and expanded jadomycins incorporating non-proteogenic amino acids.	Jakeman DL, Graham CL, Reid TR	Bioorg Med Chem Lett	10.1016/j.bmcl.2005.08.047	2005	*
Metabolism	Functional analyses of oxygenases in jadomycin biosynthesis and identification of JadH as a bifunctional oxygenase/dehydrase.	Chen YH, Wang CC, Greenwell L, Rix U, Hoffmeister D, Vining LC, Rohr J, Yang KQ	J Biol Chem	10.1074/jbc.M414229200	2005	*
Enzymology	Novel jadomycins: incorporation of non-natural and natural amino acids.	Jakeman DL, Farrell S, Young W, Doucet RJ, Timmons SC	Bioorg Med Chem Lett	10.1016/j.bmcl.2004.12.082	2005	*
Metabolism	The dynamic structure of jadomycin B and the amino acid incorporation step of its biosynthesis.	Rix U, Zheng J, Remsing Rix LL, Greenwell L, Yang K, Rohr J	J Am Chem Soc	10.1021/ja031724o	2004	*
Enzymology	Biosynthesis of the dichloroacetyl component of chloramphenicol in Streptomyces venezuelae ISP5230: genes required for halogenation.	Piraee M, White RL, Vining LC	Microbiology (Reading)	10.1099/mic.0.26319-0	2004	*
Metabolism	Control of growth, secondary metabolism and sporulation in Streptomyces venezuelae ISP5230 by jadW(1), a member of the afsA family of gamma-butyrolactone regulatory genes.	Wang L, Vining LC	Microbiology (Reading)	10.1099/mic.0.26209-0	2003	*
Enzymology	Biosynthesis of sulfur-containing amino acids in Streptomyces venezuelae ISP5230: roles for cystathionine beta-synthase and transsulfuration.	Chang Z, Vining LC	Microbiology (Reading)	10.1099/00221287-148-7-2135	2002	*
Genetics	Use of degenerate primers and touchdown PCR to amplify a halogenase gene fragment from Streptomyces venezuelae ISP5230.	Piraee M, Vining LC	J Ind Microbiol Biotechnol	10.1038/sj.jim.7000263	2002	*
Genetics	Biosynthesis of the dideoxysugar component of jadomycin B: genes in the jad cluster of Streptomyces venezuelae ISP5230 for L-digitoxose assembly and transfer to the angucycline aglycone.	Wang L, White RL, Vining LC	Microbiology (Reading)	10.1099/00221287-148-4-1091	2002	*
Metabolism	A repressor-response regulator gene pair controlling jadomycin B production in Streptomyces venezuelae ISP5230.	Yang K, Han L, He J, Wang L, Vining LC	Gene	10.1016/s0378-1119(01)00723-5	2001	*
Metabolism	The gene cluster for chloramphenicol biosynthesis in Streptomyces venezuelae ISP5230 includes novel shikimate pathway homologues and a monomodular non-ribosomal peptide synthetase gene.	He J, Magarvey N, Piraee M, Vining LC	Microbiology (Reading)	10.1099/00221287-147-10-2817	2001	*
Enzymology	p-Aminobenzoic acid and chloramphenicol biosynthesis in Streptomyces venezuelae: gene sets for a key enzyme, 4-amino-4-deoxychorismate synthase.	Chang Z, Sun Y, He J, Vining LC	Microbiology (Reading)	10.1099/00221287-147-8-2113	2001	*
Metabolism	The pdx genetic marker adjacent to the chloramphenicol biosynthesis gene cluster in Streptomyces venezuelae ISP5230: functional characterization.	Magarvey N, He J, Aidoo KA, Vining LC	Microbiology (Reading)	10.1099/00221287-147-8-2103	2001	*
Enzymology	Cloning and functional analysis of a phosphopantetheinyl transferase superfamily gene associated with jadomycin biosynthesis in Streptomyces venezuelae ISP5230.	Wang L, McVey J, Vining LC	Microbiology (Reading)	10.1099/00221287-147-6-1535	2001	*
Metabolism	An acyl-coenzyme A carboxylase encoding gene associated with jadomycin biosynthesis in Streptomyces venezuelae ISP5230.	Han L, Yang K, Kulowski K, Wendt-Pienkowski E, Hutchinson CR, Vining LC	Microbiology (Reading)	10.1099/00221287-146-4-903	2000	*
Enzymology	Cubic crystals of chloramphenicol phosphotransferase from Streptomyces venezuelae in complex with chloramphenicol.	Ellis J, Campopiano DJ, Izard T	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444999003029	1999	*
Enzymology	Regulation of an anthranilate synthase gene in Streptomyces venezuelae by a trp attenuator.	Lin C, Paradkar AS, Vining LC	Microbiology (Reading)	10.1099/00221287-144-7-1971	1998	*
Enzymology	A role for pabAB, a p-aminobenzoate synthase gene of Streptomyces venezuelae ISP5230, in chloramphenicol biosynthesis.	Brown MP, Aidoo KA, Vining LC	Microbiology (Reading)	10.1099/13500872-142-6-1345	1996	*
Enzymology	Cloning, sequencing and disruption of a bromoperoxidase-catalase gene in Streptomyces venezuelae: evidence that it is not required for chlorination in chloramphenicol biosynthesis.	Facey SJ, Gross F, Vining LC, Yang K, van Pe KH	Microbiology (Reading)	10.1099/13500872-142-3-657	1996	*
Metabolism	Regulation of jadomycin B production in Streptomyces venezuelae ISP5230: involvement of a repressor gene, jadR2.	Yang K, Han L, Vining LC	J Bacteriol	10.1128/jb.177.21.6111-6117.1995	1995	*
Enzymology	Cloning and characterization of polyketide synthase genes for jadomycin B biosynthesis in Streptomyces venezuelae ISP5230.	Han L, Yang K, Ramalingam E, Mosher RH, Vining LC	Microbiology (Reading)	10.1099/13500872-140-12-3379	1994	*
Metabolism	Conditions for the production of jadomycin B by Streptomyces venezuelae ISP5230: effects of heat shock, ethanol treatment and phage infection.	Doull JL, Singh AK, Hoare M, Ayer SW	J Ind Microbiol	10.1007/BF01584109	1994	*
Enzymology	Location of the genes for anthranilate synthase in Streptomyces venezuelae ISP5230: genetic mapping after integration of the cloned genes.	Paradkar AS, Stuttard C, Vining LC	J Gen Microbiol	10.1099/00221287-139-4-687	1993	*
Enzymology	Molecular cloning of the genes for anthranilate synthetase from Streptomyces venezuelae ISP 5230.	Paradkar AS, Stuttard C, Vining LC	FEMS Microbiol Lett	10.1016/0378-1097(91)90154-3	1991	*
Metabolism	Plasmid transformation of Streptomyces venezuelae: modified procedures used to introduce the gene(s) for p-aminobenzoate synthase.	Aidoo DA, Barrett K, Vining LC	J Gen Microbiol	10.1099/00221287-136-4-657	1990	*
Pathogenicity	Sporulation of Streptomyces venezuelae in submerged cultures.	Glazebrook MA, Doull JL, Stuttard C, Vining LC	J Gen Microbiol	10.1099/00221287-136-3-581	1990	*
Metabolism	Chloramphenicol resistance in Streptomyces: cloning and characterization of a chloramphenicol hydrolase gene from Streptomyces venezuelae.	Mosher RH, Ranade NP, Schrempf H, Vining LC	J Gen Microbiol	10.1099/00221287-136-2-293	1990	*
Enzymology	Purification, properties and immunological detection of a bromoperoxidase-catalase from Streptomyces venezuelae and from a chloramphenicol-nonproducing mutant.	Knoch M, van Pee KH, Vining LC, Lingens F	J Gen Microbiol	10.1099/00221287-135-9-2493	1989	*
Enzymology	Pilot study of jadomycin B pharmacokinetics and anti-tumoral effects in zebrafish larvae and mouse breast cancer xenograft models.	McKeown BT, Relja NJ, Hall SR, Gebremeskel S, MacLeod JM, Veinotte CJ, Bennett LG, Ohlund LB, Sleno L, Jakeman DL, Berman JN, Johnston B, Goralski KB	Can J Physiol Pharmacol	10.1139/cjpp-2022-0152	2022	*
	Protein acetylation: an important mechanism in actinobacteria.	Zhang H, Xu X	Biosci Rep	10.1042/BSR20170851	2018	*
	Watasemycin biosynthesis in Streptomyces venezuelae: thiazoline C-methylation by a type B radical-SAM methylase homologue.	Inahashi Y, Zhou S, Bibb MJ, Song L, Al-Bassam MM, Bibb MJ, Challis GL	Chem Sci	10.1039/c6sc03533g	2017	*
	Streptomyces venezuelae ISP5230 Maintains Excretion of Jadomycin upon Disruption of the MFS Transporter JadL Located within the Natural Product Biosynthetic Gene Cluster.	Forget SM, McVey J, Vining LC, Jakeman DL	Front Microbiol	10.3389/fmicb.2017.00432	2017	*
	A method for investigating the stereochemical course of terpene cyclisations.	Rabe P, Rinkel J, Klapschinski TA, Barra L, Dickschat JS	Org Biomol Chem	10.1039/c5ob01998b	2016	*

References

#9391

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40230

#18563

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

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Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38564.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces venezuelae ATCC 10712 ATCC 10712

Streptomyces venezuelae ATCC 10712 ATCC 10712

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