Strain identifier
BacDive ID: 159985
Type strain: 
Species: Odoribacter splanchnicus
Strain Designation: Cla-CZ-121
Strain history: <- T. Clavel, RWTH Aachen; Cla-CZ-121 <- C. Zenner, LMU, München;
NCBI tax ID(s): 28118 (species)
General
@ref: 66889
BacDive-ID: 159985
DSM-Number: 109117
keywords: 16S sequence, Bacteria, mesophilic
description: Odoribacter splanchnicus Cla-CZ-121 is a mesophilic bacterium that was isolated from chicken cecal content, 35 days old.
NCBI tax id
- NCBI tax id: 28118
- Matching level: species
strain history
- @ref: 66889
- history: <- T. Clavel, RWTH Aachen; Cla-CZ-121 <- C. Zenner, LMU, München;
doi: 10.13145/bacdive159985.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Bacteroidia
- order: Bacteroidales
- family: Odoribacteraceae
- genus: Odoribacter
- species: Odoribacter splanchnicus
- full scientific name: Odoribacter splanchnicus (Werner et al. 1975) Hardham et al. 2008
synonyms
- @ref: 20215
- synonym: Bacteroides splanchnicus
@ref: 66889
domain: Bacteria
phylum: Bacteroidetes
class: Bacteroidia
order: Bacteroidales
family: Odoribacteraceae
genus: Odoribacter
species: Odoribacter splanchnicus
full scientific name: Odoribacter splanchnicus (Werner et al. 1975) Hardham et al. 2008 emend. Hahnke et al. 2016
strain designation: Cla-CZ-121
type strain: no
Culture and growth conditions
culture medium
- @ref: 66889
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
- @ref: 66889
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 66889
- sample type: chicken cecal content, 35 days old
- geographic location: Munich
- country: Germany
- origin.country: DEU
- continent: Europe
- latitude: 48.1502
- longitude: 11.5857
Safety information
risk assessment
- @ref: 66889
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 66889
- description: Odoribacter splanchnicus strain ClaCZ121 16S ribosomal RNA gene, partial sequence
- accession: MN055951.1
- length: 1480
- database: ena
- NCBI tax ID: 28118
External links
@ref: 66889
culture collection no.: DSM 109117
straininfo link
- @ref: 112267
- straininfo: 402926
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66889 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-109117 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 109117) | |
| 112267 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402926.1 |