Strain identifier
BacDive ID: 15563
Type strain:
Species: Streptomyces roseofulvus
Strain history: KCC S-0334 <-- H. Nonomura <-- ISP 5172 <-- INA 14535.
NCBI tax ID(s): 33902 (species)
General
@ref: 9365
BacDive-ID: 15563
DSM-Number: 40172
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces roseofulvus DSM 40172 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 33902
- Matching level: species
strain history
@ref | history |
---|---|
9365 | <- E.B. Shirling, ISP <- T.P. Preobrazhenskaya, INA |
67770 | KCC S-0334 <-- H. Nonomura <-- ISP 5172 <-- INA 14535. |
doi: 10.13145/bacdive15563.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces roseofulvus
- full scientific name: Streptomyces roseofulvus (Preobrazhenskaya 1957) Pridham et al. 1958 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Actinomyces roseofulvus
@ref: 9365
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces roseofulvus
full scientific name: Streptomyces roseofulvus (Preobrazhenskaya 1957) Pridham et al. 1958
type strain: yes
Culture and growth conditions
culture medium
- @ref: 9365
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
9365 | positive | growth | 28 | mesophilic |
67770 | positive | growth | 28 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 9365
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_982.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_766;99_982&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: AY999872
- Sequence Identity:
- Total samples: 94
- soil counts: 21
- aquatic counts: 2
- animal counts: 3
- plant counts: 68
Safety information
risk assessment
- @ref: 9365
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces roseofulvus strain AS 4.1847 16S ribosomal RNA gene, partial sequence | AY999872 | 1431 | ena | 33902 |
20218 | Streptomyces roseofulvus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4605 | D44261 | 120 | ena | 33902 |
20218 | Streptomyces roseofulvus gene for 16S rRNA, partial sequence, strain: NBRC 13194 | AB184327 | 1457 | ena | 33902 |
20218 | Streptomyces roseofulvus gene for 16S rRNA, partial sequence, strain: NBRC 15816 | AB249916 | 1451 | ena | 33902 |
External links
@ref: 9365
culture collection no.: DSM 40172, ATCC 19805, ATCC 19921, CBS 557.68, IFO 13194, INA 14535, ISP 5172, KCC S-0334, KCC S-0605, NBRC 13194, RIA 1084, JCM 4334, BCRC 12051, CBS 124.60, CGMCC 4.1777, CGMCC 4.1847, IFO 15816, IFO 15817, JCM 4605, NBRC 15816, NBRC 15817, NRRL B-2729, VKM Ac-1080
straininfo link
- @ref: 84649
- straininfo: 37162
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9365 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40172) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40172 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
84649 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID37162.1 | StrainInfo: A central database for resolving microbial strain identifiers |