Streptomyces roseofulvus (DSM 40172, ATCC 19805, ATCC 19921)

Name: Streptomyces roseofulvus (DSM 40172, ATCC 19805, ATCC 19921)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15563

Type strain

Culture col. no. DSM 40172 ATCC 19805 ATCC 19921 CBS 557.68 IFO 13194 22 more

NCBI tax ID(s) 33902

Special Collections DSMZ JCM JMRC

History DSMZ <- E.B. Shirling, ISP <- T.P. Preobrazhenskaya, INA JCM <-- KCC S-0334 <-- H. Nonomura <-- ISP 5172 <-- INA 14535.

Links

Streptomyces roseofulvus DSM 40172 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 37162

ATCC 19921,ATCC 19805,IFO 13194,DSM 40172,JCM 4334,CCRC 12051,IFO 15816,IFO 15817,NRRL B-2729,VKM Ac-1080,JCM 4605,CBS 557.68,CBS 124.60,NBRC 13194,NBRC 15816,NBRC 15817,BCRC 12051,NRRL B-27290,AS 4.1847,CGMCC 4.1777,LMG 20263,CGMCC 4.1847

@ref 20215

Last LPSN update 2026-05-29 08:28:34

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces roseofulvus

Full scientific name Streptomyces roseofulvus (Preobrazhenskaya 1957) Pridham et al. 1958 (Approved Lists 1980)

Synonyms (1)

"Actinomyces roseofulvus"

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		92.627
125439		99.301	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9365	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9365	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	97.793

Spore formation

@ref	Spore formation	Confidence
125439		95.26

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

9365

Sample typesoil

Taxonmaps

69479

Global distribution of 16S sequence AY999872 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	2
Soil Samples	21
Animal Samples	3
Plant Samples	68
Total Samples	94

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9365	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953491v1 assembly for Streptomyces roseofulvus JCM 4334	contig	GCA_039534915	33902	76.82
124043	ASM4243098v1 assembly for Streptomyces roseofulvus JCM 4334	scaffold	GCA_042430985	33902	57.64

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces roseofulvus strain AS 4.1847 16S ribosomal RNA gene, partial sequence	AY999872	1431	33902
20218	Streptomyces roseofulvus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4605	D44261	120	33902
20218	Streptomyces roseofulvus gene for 16S rRNA, partial sequence, strain: NBRC 13194	AB184327	1457	33902
20218	Streptomyces roseofulvus gene for 16S rRNA, partial sequence, strain: NBRC 15816	AB249916	1451	33902
124043	Streptomyces roseofulvus strain JCM 4334 16S ribosomal RNA gene, partial sequence.	MT760512	1347	33902

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3953491v1 assembly for Streptomyces roseofulvus JCM 4334
NCBI: GCA_039534915

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	97.79	no
125439	motility	BacteriaNetⓘ	no	92.63	no
125439	gram_stain	BacteriaNetⓘ	positive	99.30	no
125439	spore_formation	BacteriaNetⓘ	yes	95.26	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Isolation and biosynthesis of daturamycins from Streptomyces sp. KIB-H1544.	Chen Y, Ren J, Yang R, Li J, Huang SX, Yan Y.	Beilstein J Org Chem	10.3762/bjoc.18.101	2022
Pathogenicity	A novel hedgehog inhibitor iG2 suppresses tumorigenesis by impairing self-renewal in human bladder cancer.	Zhu L, Ni C, Dong B, Zhang Y, Shi Y, Niu H, Li C.	Cancer Med	10.1002/cam4.802	2016
Metabolism	The oligopeptide permease (Opp) of the plant pathogen Xanthomonas axonopodis pv. citri.	Moutran A, Quaggio RB, Balan A, Ferreira LC, Ferreira Rde C.	Curr Microbiol	10.1007/s00284-003-4206-2	2004
Phylogeny	Spore forming Actinobacterial diversity of Cholistan Desert Pakistan: Polyphasic taxonomy, antimicrobial potential and chemical profiling.	Fatima A, Aftab U, Shaaban KA, Thorson JS, Sajid I.	BMC Microbiol	10.1186/s12866-019-1414-x	2019
Pathogenicity	Efficacy of a Chitin-Based Water-Soluble Derivative in Inducing Purpureocillium lilacinum against Nematode Disease (Meloidogyne incognita).	Zhan J, Qin Y, Gao K, Fan Z, Wang L, Xing R, Liu S, Li P.	Int J Mol Sci	10.3390/ijms22136870	2021
	Chaetocin Abrogates the Self-Renewal of Bladder Cancer Stem Cells via the Suppression of the KMT1A-GATA3-STAT3 Circuit.	Yang Z, Wang H, Zhang N, Xing T, Zhang W, Wang G, Li C, Yu C.	Front Cell Dev Biol	10.3389/fcell.2020.00424	2020
Metabolism	Engineered biosynthesis of the antiparasitic agent frenolicin B and rationally designed analogs in a heterologous host.	Fitzgerald JT, Ridley CP, Khosla C.	J Antibiot (Tokyo)	10.1038/ja.2011.86	2011
	Cloning, sequencing and deduced functions of a cluster of Streptomyces genes probably encoding biosynthesis of the polyketide antibiotic frenolicin.	Bibb MJ, Sherman DH, Omura S, Hopwood DA.	Gene	10.1016/0378-1119(94)90351-4	1994
	DNA sequence and functions of the actVI region of the actinorhodin biosynthetic gene cluster of Streptomyces coelicolor A3(2).	Fernandez-Moreno MA, Martinez E, Caballero JL, Ichinose K, Hopwood DA, Malpartida F.	J Biol Chem	10.1016/s0021-9258(17)31469-2	1994
Metabolism	[Fructose assimilation by differentiated and undifferentiated variants of Streptomyces roseofulvus].	Disler EN, Goncharova LF, Kalakutskii LV.	Mikrobiologiia		1980
Metabolism	Solution structures of spinach acyl carrier protein with decanoate and stearate.	Zornetzer GA, Fox BG, Markley JL.	Biochemistry	10.1021/bi052062d	2006
Enzymology	Engineered biosynthesis of novel polyketides: influence of a downstream enzyme on the catalytic specificity of a minimal aromatic polyketide synthase.	McDaniel R, Ebert-Khosla S, Fu H, Hopwood DA, Khosla C.	Proc Natl Acad Sci U S A	10.1073/pnas.91.24.11542	1994
Metabolism	Expression, purification, and characterization of AknX anthrone oxygenase, which is involved in aklavinone biosynthesis in Streptomyces galilaeus.	Chung JY, Fujii I, Harada S, Sankawa U, Ebizuka Y.	J Bacteriol	10.1128/jb.184.22.6115-6122.2002	2002
Phylogeny	Phylogenetic distribution and membrane topology of the LytR-CpsA-Psr protein family.	Hubscher J, Luthy L, Berger-Bachi B, Stutzmann Meier P.	BMC Genomics	10.1186/1471-2164-9-617	2008
	Solution structure of Asl1650, an acyl carrier protein from Anabaena sp. PCC 7120 with a variant phosphopantetheinylation-site sequence.	Johnson MA, Peti W, Herrmann T, Wilson IA, Wuthrich K.	Protein Sci	10.1110/ps.051964606	2006
Metabolism	Engineered biosynthesis of regioselectively modified aromatic polyketides using bimodular polyketide synthases.	Tang Y, Lee TS, Khosla C.	PLoS Biol	10.1371/journal.pbio.0020031	2004
Metabolism	Doxorubicin overproduction in Streptomyces peucetius: cloning and characterization of the dnrU ketoreductase and dnrV genes and the doxA cytochrome P-450 hydroxylase gene.	Lomovskaya N, Otten SL, Doi-Katayama Y, Fonstein L, Liu XC, Takatsu T, Inventi-Solari A, Filippini S, Torti F, Colombo AL, Hutchinson CR.	J Bacteriol	10.1128/jb.181.1.305-318.1999	1999

References

#9365	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40172
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces roseofulvus (DSM 40172, ATCC 19805, ATCC 19921)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039534915

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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