Strain identifier
BacDive ID: 15508
Type strain: 
Species: Streptomyces racemochromogenes
Strain Designation: 229
Strain history: KCC S-0407 <-- IFO 12906 <-- SAJ <-- ISP 5194 <-- Meiji Seika Kaisha, Ltd.; 229.
NCBI tax ID(s): 67353 (species)
version 9 (current version)
General
@ref: 9255
BacDive-ID: 15508
DSM-Number: 40194
keywords: 16S sequence, Bacteria, antibiotic compound production
description: Streptomyces racemochromogenes 229 is a bacterium that produces antibiotic compounds.
NCBI tax id
- NCBI tax id: 67353
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9255 | <- E.B. Shirling, ISP <- M. Oda, Meiji Seika Co., 229 |
| 67770 | KCC S-0407 <-- IFO 12906 <-- SAJ <-- ISP 5194 <-- Meiji Seika Kaisha, Ltd.; 229. |
doi: 10.13145/bacdive15508.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces racemochromogenes
- full scientific name: Streptomyces racemochromogenes Sugai 1956 (Approved Lists 1980)
@ref: 9255
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces racemochromogenes
full scientific name: Streptomyces racemochromogenes Sugai 1956
strain designation: 229
type strain: yes
Culture and growth conditions
culture medium
- @ref: 9255
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 9255 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 9255 | racemomycine complex |
| 9255 | streptothricin complex |
| 67770 | Racemomycin |
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_1810.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_144;99_1810&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: EU035296
- Sequence Identity:
- Total samples: 6072
- soil counts: 4236
- aquatic counts: 230
- animal counts: 299
- plant counts: 1307
Safety information
risk assessment
- @ref: 9255
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces racemochromogenes gene for 16S ribosomal RNA, partial sequence, strain: JCM 4407 | D44122 | 120 | nuccore | 67353 |
| 20218 | Streptomyces racemochromogenes gene for 16S rRNA, partial sequence, strain: NBRC 12906 | AB184235 | 1459 | nuccore | 67353 |
| 20218 | Streptomyces racemochromogenes strain NRRL B-5430 16S ribosomal RNA gene, partial sequence | DQ026656 | 1497 | nuccore | 67353 |
| 20218 | Streptomyces sp. HNS2-2 16S ribosomal RNA gene, partial sequence | EU035296 | 1074 | nuccore | 458141 |
| 124043 | Streptomyces racemochromogenes strain DSM 40194 16S ribosomal RNA gene, partial sequence. | KP082880 | 1518 | nuccore | 1620694 |
| 124043 | Streptomyces racemochromogenes strain DSM 40194 16S ribosomal RNA gene, partial sequence. | KP082881 | 1517 | nuccore | 1620692 |
| 124043 | Streptomyces racemochromogenes strain DSM 40194 16S ribosomal RNA gene, partial sequence. | KP082882 | 1518 | nuccore | 1620693 |
| 124043 | Streptomyces racemochromogenes strain DSM 40194 16S ribosomal RNA gene, partial sequence. | KP082883 | 1385 | nuccore | 67353 |
External links
@ref: 9255
culture collection no.: DSM 40194, ATCC 23954, CBS 937.68, IFO 12906, ISP 5194, JCM 4407, NBRC 12906, RIA 1147, BCRC 12318, CGMCC 4.1998, NRRL B-5430, VKM Ac-1206
straininfo link
- @ref: 84594
- straininfo: 38300
literature
- topic: Phylogeny
- Pubmed-ID: 26703868
- title: Streptomyces yangpuensis sp. nov., isolated from soil.
- authors: Tang B, Yu Y, Zhi X, Yang L, Cen X, Zhao G, Ding X
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.000861
- year: 2015
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9255 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40194) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40194 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84594 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID38300.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |