Strain identifier
BacDive ID: 15394
Type strain: 
Species: Streptomyces mashuensis
Strain history: KCC S-0486 <-- IFO 13052 <-- SAJ <-- ISP 5397 <-- R. Shinobu 738.
NCBI tax ID(s): 67310 (species)
General
@ref: 9520
BacDive-ID: 15394
DSM-Number: 40397
keywords: 16S sequence, Bacteria
description: Streptomyces mashuensis DSM 40397 is a bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 67310
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9520 | <- E.B. Shirling, ISP <- R. Shinobu, OEU, 738 |
| 67770 | KCC S-0486 <-- IFO 13052 <-- SAJ <-- ISP 5397 <-- R. Shinobu 738. |
doi: 10.13145/bacdive15394.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces mashuensis
- full scientific name: Streptomyces mashuensis (Sawazaki et al. 1955) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptoverticillium kishiwadense 20215 Streptoverticillium mashuense 20215 Streptomyces kishiwadensis 20215 Streptomyces mashuensis
@ref: 9520
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces mashuensis
full scientific name: Streptomyces mashuensis (Sawazaki et al. 1955) Witt and Stackebrandt 1991
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9520 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9520 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 9520 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
- geographic location: Kishiwada, Osaka
- country: Japan
- origin.country: JPN
- continent: Asia
Safety information
risk assessment
- @ref: 9520
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces kishiwadensis gene for 16S rRNA, partial sequence, strain: NBRC 13052 | AB184858 | 1471 | nuccore | 67310 |
| 67770 | Streptomyces kishiwadensis 16S rRNA gene, type strain LMG 19939 | AJ781338 | 1479 | nuccore | 67310 |
| 124043 | Streptomyces kishiwadensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4486. | D44180 | 121 | nuccore | 67310 |
External links
@ref: 9520
culture collection no.: DSM 40397, ATCC 25464, CBS 697.69, IFO 13052, ISP 5397, NBRC 13052, RIA 1244, OEU 738, JCM 4486, BCRC 16232, CGMCC 4.1894, NRRL B-12326, VKM Ac-931
straininfo link
- @ref: 84484
- straininfo: 45756
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9520 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40397) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40397 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 84484 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID45756.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |