Strain identifier

BacDive ID: 153408

Type strain: No

Species: Aggregatibacter aphrophilus

NCBI tax ID(s): 732 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 58581

BacDive-ID: 153408

keywords: genome sequence, Bacteria, Gram-negative

description: Aggregatibacter aphrophilus CCUG 49494 is a Gram-negative bacterium of the family Pasteurellaceae.

NCBI tax id

  • NCBI tax id: 732
  • Matching level: species

doi: 10.13145/bacdive153408.20240916.9.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Aggregatibacter
  • species: Aggregatibacter aphrophilus
  • full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006
  • synonyms

    @refsynonym
    20215Haemophilus paraphrophilus
    20215Haemophilus aphrophilus

@ref: 58581

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Aggregatibacter

species: Aggregatibacter aphrophilus

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no91.2
6948097.438negative

Physiology and metabolism

spore formation

@refspore formationconfidence
69480no90.617
69481no100

Sequence information

Genome sequences

  • @ref: 66792
  • description: Aggregatibacter aphrophilus strain HK83
  • accession: 732.170
  • assembly level: wgs
  • database: patric
  • NCBI tax ID: 732

Genome-based predictions

predictions

@reftraitmodeldescriptionpredictionconfidencetraining_data
69481spore-formingspore-formingAbility to form endo- or exosporesno100no
69480gram-positivegram-positivePositive reaction to Gram-stainingno97.438no
69480anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no92.459no
69480spore-formingspore-formingAbility to form endo- or exosporesno90.617no
69480aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no84.533no
69480thermophilicthermophileAbility to grow at temperatures above or equal to 45°Cno97.5no
69480flagellatedmotile2+Ability to perform flagellated movementno91.2no

External links

@ref: 58581

culture collection no.: CCUG 49494

straininfo link

  • @ref: 107215
  • straininfo: 214661

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58581Curators of the CCUGhttps://www.ccug.se/strain?id=49494Culture Collection University of Gothenburg (CCUG) (CCUG 49494)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
107215Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214661.1