Strain identifier

BacDive ID: 152561

Type strain: No

Species: Achromobacter insolitus

NCBI tax ID(s): 217204 (species)

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General

@ref: 57485

BacDive-ID: 152561

keywords: genome sequence, Bacteria, aerobe, motile

description: Achromobacter insolitus CCUG 47056 is an aerobe, motile bacterium that was isolated from Laboratory sink.

NCBI tax id

  • NCBI tax id: 217204
  • Matching level: species

doi: 10.13145/bacdive152561.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter insolitus
  • full scientific name: Achromobacter insolitus Coenye et al. 2003

@ref: 57485

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter insolitus

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes96.786
6948099.988negative

Culture and growth conditions

culture temp

  • @ref: 57485
  • growth: positive
  • type: growth
  • temperature: 30-42

Physiology and metabolism

oxygen tolerance

  • @ref: 57485
  • oxygen tolerance: aerobe

spore formation

@refspore formationconfidence
69480no99.98
69481no100

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57485C12:00.812
    57485C14:04.714
    57485C15:00.515
    57485C16:03516
    57485C17:00.817
    57485C18:01.718
    57485C12:0 2OH2.113.178
    57485C12:0 ALDE ?2.610.915
    57485C14:0 3OH/C16:1 ISO I3.815.485
    57485C16:1 ω7c27.415.819
    57485C17:0 CYCLO12.716.888
    57485C18:1 ω7c /12t/9t6.617.824
    57485C18:2 ω6,9c/C18:0 ANTE0.717.724
    57485C19:0 CYCLO ω8c0.618.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57485-++--+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
57485+-------+-----+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 57485
  • sample type: Laboratory sink

isolation source categories

Cat1Cat2Cat3
#Engineered#Built environment#Water reservoir (Aquarium/pool)
#Engineered#Laboratory

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Achromobacter insolitus LMG 5997GCA_902860175contigncbi217204
66792Achromobacter insolitus strain LMG 5997217204.15wgspatric217204

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileyes84.488no
gram-positiveno98.267no
anaerobicno98.263yes
aerobicyes85.555yes
halophileno90.802no
spore-formingno93.964no
glucose-utilno55.211yes
thermophileno99.554no
flagellatedno65.424no
glucose-fermentno91.827no

External links

@ref: 57485

culture collection no.: CCUG 47056, LMG 5997

straininfo link

  • @ref: 106508
  • straininfo: 788

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57485Curators of the CCUGhttps://www.ccug.se/strain?id=47056Culture Collection University of Gothenburg (CCUG) (CCUG 47056)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
106508Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID788.1