Strain identifier
BacDive ID: 149192
Type strain: 
Species: Burkholderia multivorans
NCBI tax ID(s): 395019 (strain), 87883 (species)
version 8.1 (current version)
General
@ref: 53550
BacDive-ID: 149192
keywords: genome sequence, Bacteria, Gram-negative
description: Burkholderia multivorans CCUG 37245 is a Gram-negative bacterium that was isolated from Soil enriched with anthranilate at 41°C.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 395019 | strain |
| 87883 | species |
doi: 10.13145/bacdive149192.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Burkholderiaceae
- genus: Burkholderia
- species: Burkholderia multivorans
- full scientific name: Burkholderia multivorans Vandamme et al. 1997
@ref: 53550
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Burkholderiaceae
genus: Burkholderia
species: Burkholderia multivorans
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.986
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.993 |
| 69481 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 53550
- sample type: Soil enriched with anthranilate at 41°C
- geographic location: California,Berkeley
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Laboratory | #Lab enrichment |
| #Environmental | #Terrestrial | #Soil |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Burkholderia multivorans ATCC 17616 | GCA_000010545 | complete | ncbi | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | GCA_000018505 | complete | ncbi | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | 395019.46 | plasmid | patric | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | 395019.8 | complete | patric | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | 395019.47 | plasmid | patric | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 (Prj:19401) | 395019.7 | complete | patric | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | 642555111 | complete | img | 395019 |
| 66792 | Burkholderia multivorans ATCC 17616 | 641228482 | complete | img | 395019 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | yes | 90.181 | no |
| flagellated | no | 84.812 | no |
| gram-positive | no | 98.44 | no |
| anaerobic | no | 98.494 | no |
| halophile | no | 93.458 | no |
| spore-forming | no | 93.519 | no |
| thermophile | no | 99.498 | no |
| glucose-util | yes | 91.03 | no |
| aerobic | yes | 89.925 | no |
| glucose-ferment | no | 90.1 | no |
External links
@ref: 53550
culture collection no.: CCUG 37245, ATCC 17616, LMG 17588
straininfo link
- @ref: 103638
- straininfo: 10077
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Genetics | 11814664 | Characterization of N-acyl homoserine lactone overproducing mutants of Burkholderia multivorans ATCC 17616. | Yao F, Zhou H, Lessie TG | FEMS Microbiol Lett | 10.1111/j.1574-6968.2002.tb11010.x | 2002 | 4-Butyrolactone/*analogs & derivatives, Amino Acid Sequence, *Bacterial Proteins, Biological Assay, Burkholderia/genetics/*metabolism, Genes, Bacterial, Homoserine/*analogs & derivatives, Ligases/genetics, Molecular Sequence Data, Mutation, Selection, Genetic, Trans-Activators/genetics | Metabolism |
| Genetics | 12754231 | Distribution and organization of auxotrophic genes on the multichromosomal genome of Burkholderia multivorans ATCC 17616. | Komatsu H, Imura Y, Ohori A, Nagata Y, Tsuda M | J Bacteriol | 10.1128/JB.185.11.3333-3343.2003 | 2003 | Amino Acids/*metabolism, Bacterial Proteins/*genetics/metabolism, Burkholderia/genetics/*growth & development, *Chromosome Mapping, *Chromosomes, Bacterial, DNA Transposable Elements, *Genome, Bacterial, Molecular Sequence Data, Mutagenesis, Insertional, Sequence Analysis, DNA, rRNA Operon | Metabolism |
| Stress | 15812007 | High-temperature-induced transposition of insertion elements in burkholderia multivorans ATCC 17616. | Ohtsubo Y, Genka H, Komatsu H, Nagata Y, Tsuda M | Appl Environ Microbiol | 10.1128/AEM.71.4.1822-1828.2005 | 2005 | Base Sequence, Burkholderia/*genetics/*growth & development, Conjugation, Genetic, DNA Primers, DNA Transposable Elements/*genetics, *Gene Expression Regulation, Bacterial, *Hot Temperature, Molecular Sequence Data, Plasmids, Sequence Analysis, DNA | Genetics |
| Phylogeny | 16233838 | Organization and localization of the dnaA and dnaK gene regions on the multichromosomal genome of Burkholderia multivorans ATCC 17616. | Nagata Y, Matsuda M, Komatsu H, Imura Y, Sawada H, Ohtsubo Y, Tsuda M | J Biosci Bioeng | 10.1263/jbb.99.603 | 2005 | Bacterial Proteins/*genetics, Base Sequence, Burkholderia/classification/*genetics, Chromosome Mapping/*methods, Chromosomes, Bacterial/*genetics, DNA-Binding Proteins/*genetics, Escherichia coli Proteins/*genetics, Gene Dosage, HSP70 Heat-Shock Proteins/*genetics, Molecular Sequence Data, Species Specificity | Genetics |
| Metabolism | 18524931 | Pleiotropic roles of iron-responsive transcriptional regulator Fur in Burkholderia multivorans. | Yuhara S, Komatsu H, Goto H, Ohtsubo Y, Nagata Y, Tsuda M | Microbiology (Reading) | 10.1099/mic.0.2007/015537-0 | 2008 | Bacterial Proteins/*genetics/*metabolism, Base Sequence, Burkholderia/*genetics/*metabolism, Carbon/metabolism, Cloning, Molecular, *Gene Expression Regulation, Bacterial/drug effects, Microbial Sensitivity Tests, Molecular Sequence Data, Nitrogen Compounds/pharmacology, Protein Binding, Reactive Oxygen Species/pharmacology, Repressor Proteins/*genetics/*metabolism, Sequence Deletion | Enzymology |
| Genetics | 20412282 | Identification of Burkholderia multivorans ATCC 17616 genes induced in soil environment by in vivo expression technology. | Nishiyama E, Ohtsubo Y, Nagata Y, Tsuda M | Environ Microbiol | 10.1111/j.1462-2920.2010.02227.x | 2010 | Burkholderia cepacia complex/*genetics, DNA, Bacterial/genetics, Gene Library, *Genes, Bacterial, Genes, Reporter, Genome, Bacterial, Sequence Analysis, DNA, Soil/analysis, *Soil Microbiology | Transcriptome |
| Metabolism | 22006009 | Identification of hopanoid biosynthesis genes involved in polymyxin resistance in Burkholderia multivorans. | Malott RJ, Steen-Kinnaird BR, Lee TD, Speert DP | Antimicrob Agents Chemother | 10.1128/AAC.00602-11 | 2011 | 1-Naphthylamine/analogs & derivatives/metabolism, Animals, Anti-Bacterial Agents/metabolism/pharmacology, Bacterial Outer Membrane Proteins/genetics/*metabolism, Burkholderia Infections/drug therapy/microbiology, Burkholderia cepacia complex/genetics/*metabolism, Cell Membrane/chemistry/metabolism, Cell Membrane Permeability/*genetics, Colistin/metabolism/pharmacology, DNA Transposable Elements, Drug Resistance, Bacterial, Genomic Library, Microbial Sensitivity Tests, Multigene Family, Mutation, Open Reading Frames, Polymyxin B/metabolism/*pharmacology, Sterols/*biosynthesis | |
| Metabolism | 22360670 | Pivotal role of anthranilate dioxygenase genes in the adaptation of Burkholderia multivorans ATCC 17616 in soil. | Nishiyama E, Ohtsubo Y, Yamamoto Y, Nagata Y, Tsuda M | FEMS Microbiol Lett | 10.1111/j.1574-6968.2012.02532.x | 2012 | Adaptation, Physiological, Bacterial Proteins/metabolism, Burkholderia/enzymology/genetics/*physiology, Gene Expression Profiling, Mixed Function Oxygenases/*biosynthesis/genetics, Promoter Regions, Genetic, Repressor Proteins/metabolism, *Soil Microbiology, *Stress, Physiological, Tryptophan/metabolism, ortho-Aminobenzoates/metabolism | Enzymology |
| Metabolism | 22361941 | Suppression of pleiotropic phenotypes of a Burkholderia multivorans fur mutant by oxyR mutation. | Kimura A, Yuhara S, Ohtsubo Y, Nagata Y, Tsuda M | Microbiology (Reading) | 10.1099/mic.0.057372-0 | 2012 | Bacterial Proteins/genetics/*metabolism, Burkholderia/*genetics/metabolism, Catalase/metabolism, DNA, Bacterial/genetics, Gene Expression Regulation, Bacterial, Hydrogen Peroxide/metabolism, Iron/metabolism, Mutation, Nitrites/metabolism, Oxidative Stress, Peroxidases/metabolism, Peroxiredoxins/metabolism, Phenotype, Repressor Proteins/genetics/*metabolism, Sequence Analysis, DNA, *Suppression, Genetic | Phenotype |
| Pathogenicity | 23105020 | Burkholderia multivorans survival and trafficking within macrophages. | Schmerk CL, Valvano MA | J Med Microbiol | 10.1099/jmm.0.051243-0 | 2012 | Animals, Biological Transport, Burkholderia Infections/complications/drug therapy/microbiology, Burkholderia cepacia complex/immunology/pathogenicity/*physiology, Cell Line, Cystic Fibrosis/microbiology, Dextrans, Humans, Lipopolysaccharides/analysis, Lysosome-Associated Membrane Glycoproteins/metabolism, Macrophages/*microbiology, Mice, Microbial Viability, Moths/*microbiology, O Antigens/biosynthesis, Species Specificity, Vacuoles/metabolism/microbiology | Metabolism |
| Pathogenicity | 24163337 | Comparative metabolic systems analysis of pathogenic Burkholderia. | Bartell JA, Yen P, Varga JJ, Goldberg JB, Papin JA | J Bacteriol | 10.1128/JB.00997-13 | 2013 | Burkholderia Infections/microbiology, Burkholderia cepacia complex/*genetics/growth & development/*metabolism/pathogenicity, Computer Simulation, Cystic Fibrosis/complications, Humans, Metabolic Networks and Pathways/*genetics, Metabolome, *Systems Biology, Virulence | Metabolism |
| Pathogenicity | 24196427 | Growth on mannitol-rich media elicits a genome-wide transcriptional response in Burkholderia multivorans that impacts on multiple virulence traits in an exopolysaccharide-independent manner. | Denman CC, Robinson MT, Sass AM, Mahenthiralingam E, Brown AR | Microbiology (Reading) | 10.1099/mic.0.072975-0 | 2013 | Animals, Biofilms/growth & development, Burkholderia cepacia complex/genetics/growth & development/*pathogenicity/*physiology, Cell Line, Culture Media/chemistry, Endocytosis, Epithelial Cells/microbiology, Gene Expression Profiling, Gene Expression Regulation, Bacterial/*genetics, Humans, Lepidoptera/microbiology, Locomotion, Mannitol/*metabolism, Polysaccharides, Bacterial/biosynthesis, Survival Analysis, Transcription, Genetic, Virulence Factors/*biosynthesis | Cultivation |
| 24530988 | Identification of Burkholderia multivorans ATCC 17616 genetic determinants for fitness in soil by using signature-tagged mutagenesis. | Nagata Y, Senbongi J, Ishibashi Y, Sudo R, Miyakoshi M, Ohtsubo Y, Tsuda M | Microbiology (Reading) | 10.1099/mic.0.077057-0 | 2014 | Burkholderia/genetics/*physiology, Gene Deletion, Genes, Bacterial, Genetic Complementation Test, *Mutagenesis, Insertional, *Soil Microbiology | ||
| Metabolism | 28625994 | The Small Protein HemP Is a Transcriptional Activator for the Hemin Uptake Operon in Burkholderia multivorans ATCC 17616. | Sato T, Nonoyama S, Kimura A, Nagata Y, Ohtsubo Y, Tsuda M | Appl Environ Microbiol | 10.1128/AEM.00479-17 | 2017 | Bacterial Proteins/genetics/*metabolism, Biological Transport, Burkholderia/genetics/*metabolism, *Gene Expression Regulation, Bacterial, Hemin/*metabolism, Operon, Promoter Regions, Genetic, Trans-Activators/genetics/*metabolism, Transcriptional Activation | |
| Metabolism | 30012762 | Characterization of the AmpC beta-Lactamase from Burkholderia multivorans. | Becka SA, Zeiser ET, Barnes MD, Taracila MA, Nguyen K, Singh I, Sutton GG, LiPuma JJ, Fouts DE, Papp-Wallace KM | Antimicrob Agents Chemother | 10.1128/AAC.01140-18 | 2018 | Amino Acid Sequence, Anti-Bacterial Agents/*pharmacology, Azabicyclo Compounds/pharmacology, Bacterial Proteins/*chemistry/*metabolism, Burkholderia/*drug effects/*enzymology, Cephalosporinase/chemistry/metabolism, Cephalosporins/pharmacology, Cephalothin/pharmacology, Imipenem/pharmacology, Microbial Sensitivity Tests, Protein Structure, Secondary, beta-Lactamases/*chemistry/*metabolism, beta-Lactams/*pharmacology | Enzymology |
| Pathogenicity | 31167848 | "Switching Partners": Piperacillin-Avibactam Is a Highly Potent Combination against Multidrug-Resistant Burkholderia cepacia Complex and Burkholderia gladioli Cystic Fibrosis Isolates. | Zeiser ET, Becka SA, Wilson BM, Barnes MD, LiPuma JJ, Papp-Wallace KM | J Clin Microbiol | 10.1128/JCM.00181-19 | 2019 | Anti-Bacterial Agents/pharmacology, Azabicyclo Compounds/*pharmacology, Burkholderia Infections/drug therapy, Burkholderia cepacia complex/*drug effects, Burkholderia gladioli/*drug effects, Cystic Fibrosis/complications/*microbiology, *Drug Resistance, Multiple, Bacterial, Drug Substitution, Humans, Kinetics, Microbial Sensitivity Tests, Piperacillin/*pharmacology | Enzymology |
| Metabolism | 32628999 | A transcriptional regulator, IscR, of Burkholderia multivorans acts as both repressor and activator for transcription of iron-sulfur cluster-biosynthetic isc operon. | Nonoyama S, Kishida K, Sakai K, Nagata Y, Ohtsubo Y, Tsuda M | Res Microbiol | 10.1016/j.resmic.2020.06.005 | 2020 | Bacterial Proteins/genetics/*metabolism, Burkholderia/*genetics/metabolism, DNA, Bacterial, Gene Expression Regulation, Bacterial, Iron-Sulfur Proteins/genetics/*metabolism, Metabolic Networks and Pathways/genetics, Mutation, Operon, Promoter Regions, Genetic, Protein Binding, Repressor Proteins/genetics/*metabolism, Transcription Factors/genetics/metabolism | |
| Genetics | 33931418 | A Histone-Like Nucleoid Structuring Protein Regulates Several Virulence Traits in Burkholderia multivorans. | Gomes SC, Ferreira MR, Tavares AF, Silva IN, Becker JD, Moreira LM | Appl Environ Microbiol | 10.1128/AEM.00369-21 | 2021 | Bacterial Adhesion, Bacterial Proteins/*genetics, Burkholderia/*genetics/*pathogenicity/physiology, Cell Aggregation, Cell Line, Gene Expression Regulation, Bacterial, Genes, Bacterial, Genome, Bacterial, Histones, Humans, Hydrophobic and Hydrophilic Interactions, Phenotype, Polysaccharides, Bacterial/biosynthesis, Virulence/*genetics | Pathogenicity |
| 35625319 | The Class A beta-Lactamase Produced by Burkholderia Species Compromises the Potency of Tebipenem against a Panel of Isolates from the United States. | Becka SA, Zeiser ET, LiPuma JJ, Papp-Wallace KM | Antibiotics (Basel) | 10.3390/antibiotics11050674 | 2022 |
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 53550 | Curators of the CCUG | https://www.ccug.se/strain?id=37245 | Culture Collection University of Gothenburg (CCUG) (CCUG 37245) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |||
| 103638 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID10077.1 |