Strain identifier
version 8.1 (current version)
General
@ref: 45055
BacDive-ID: 141869
keywords: genome sequence, Bacteria, anaerobe, spore-forming, Gram-positive
description: Clostridium botulinum CCUG 7974 is an anaerobe, spore-forming, Gram-positive bacterium of the family Clostridiaceae.
NCBI tax id
- NCBI tax id: 1491
- Matching level: species
doi: 10.13145/bacdive141869.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium botulinum
- full scientific name: Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus botulinus
@ref: 45055
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Clostridiaceae
genus: Clostridium
species: Clostridium botulinum
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 100
Physiology and metabolism
oxygen tolerance
- @ref: 69480
- oxygen tolerance: anaerobe
- confidence: 98.65
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | yes | 100 |
| 69480 | yes | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 45055
- country: Canada
- origin.country: CAN
- continent: North America
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Clostridium botulinum NCTC 8266 | GCA_000827935 | complete | ncbi | 1491 |
| 66792 | Clostridium botulinum NCTC 8266 | 1491.354 | complete | patric | 1491 |
| 66792 | Clostridium botulinum NCTC 8266 | 2651869840 | complete | img | 1491 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 100 | no |
| motile | yes | 85.856 | no |
| flagellated | yes | 63.013 | no |
| gram-positive | yes | 72.152 | no |
| anaerobic | yes | 98.776 | no |
| aerobic | no | 98.866 | no |
| halophile | no | 92.569 | no |
| spore-forming | yes | 95.197 | no |
| glucose-util | yes | 87.057 | no |
| thermophile | no | 97.581 | no |
| glucose-ferment | yes | 67.185 | no |
External links
@ref: 45055
culture collection no.: CCUG 7974, NCTC 8266
straininfo link
- @ref: 97472
- straininfo: 52862
literature
- topic: Genetics
- Pubmed-ID: 25767228
- title: Two Complete and One Draft Genome Sequence of Nonproteolytic Clostridium botulinum Type E Strains NCTC 8266, NCTC 8550, and NCTC 11219.
- authors: Clauwers C, Briers Y, Lavigne R, Michiels CW
- journal: Genome Announc
- DOI: 10.1128/genomeA.00083-15
- year: 2015
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45055 | Curators of the CCUG | https://www.ccug.se/strain?id=7974 | Culture Collection University of Gothenburg (CCUG) (CCUG 7974) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 97472 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52862.1 |