Strain identifier
BacDive ID: 139436
Type strain: 
Species: Lactiplantibacillus modestisalitolerans
Strain Designation: NB446
Strain history: CIP <- 2015, NBRC <- BCC <- P. Rattanawaree, Thailand: strain NB446
NCBI tax ID(s): 1457219 (species)
version 8.1 (current version)
General
@ref: 41631
BacDive-ID: 139436
keywords: genome sequence, Bacteria, mesophilic
description: Lactiplantibacillus modestisalitolerans NB446 is a mesophilic bacterium of the family Lactobacillaceae.
NCBI tax id
- NCBI tax id: 1457219
- Matching level: species
strain history
- @ref: 41631
- history: CIP <- 2015, NBRC <- BCC <- P. Rattanawaree, Thailand: strain NB446
doi: 10.13145/bacdive139436.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lactiplantibacillus
- species: Lactiplantibacillus modestisalitolerans
- full scientific name: Lactiplantibacillus modestisalitolerans (Miyashita et al. 2015) Zheng et al. 2020
synonyms
- @ref: 20215
- synonym: Lactobacillus modestisalitolerans
@ref: 41631
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus modestisalitolerans
strain designation: NB446
type strain: yes
Morphology
cell morphology
| @ref | motility | confidence | gram stain | cell shape |
|---|---|---|---|---|
| 69480 | no | 98.006 | ||
| 69480 | 100 | positive | ||
| 41631 | no | positive | rod-shaped |
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41631 | MEDIUM 40- for Lactobacillus and Leuconostoc | yes | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |
| 41631 | CIP Medium 40 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40 |
culture temp
- @ref: 41631
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.998 |
Isolation, sampling and environmental information
isolation
| @ref | country | origin.country | continent | sample type | geographic location | isolation date |
|---|---|---|---|---|---|---|
| 41631 | Thailand | THA | Asia | |||
| 41631 | Thailand | THA | Asia | Fermented fish, Pla-jom | Surin, Thailand | 2008-08-01 |
Safety information
risk assessment
- @ref: 41631
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Lactiplantibacillus modestisalitolerans NBRC 107235 | GCA_005405425 | contig | ncbi | 1457219 |
| 66792 | Lactobacillus modestisalitolerans strain NBRC 107235 | 1457219.4 | wgs | patric | 1457219 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 95.362 | no |
| gram-positive | yes | 96.862 | no |
| anaerobic | no | 93.895 | no |
| halophile | yes | 88.454 | no |
| spore-forming | no | 94.636 | no |
| thermophile | no | 99.655 | yes |
| glucose-util | yes | 91.63 | no |
| aerobic | no | 97.263 | no |
| flagellated | no | 97.463 | no |
| glucose-ferment | yes | 89.427 | no |
External links
@ref: 41631
culture collection no.: CIP 110953, NBRC 107235, BCC 38191
straininfo link
- @ref: 95938
- straininfo: 413088
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 41631 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110953 | Collection of Institut Pasteur (CIP 110953) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 95938 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID413088.1 |