Lactiplantibacillus modestisalitolerans (CIP 110953, NBRC 107235, BCC 38191)

Name: Lactiplantibacillus modestisalitolerans (CIP 110953, NBRC 107235, BCC 38191)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 139436

Type strain

Strain Designation NB446

Culture col. no. CIP 110953 NBRC 107235 BCC 38191 NB446

NCBI tax ID(s) 1457219

Special Collections CIP

History CIP <- 2015, NBRC <- BCC <- P. Rattanawaree, Thailand: strain NB446

Links

Lactiplantibacillus modestisalitolerans NB446 is a Gram-positive, rod-shaped bacterium of the family Lactobacillaceae.

Gram-positive rod-shaped genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 413088

LMG 30824,NBRC 107235,CIP 110953

@ref 20215

Last LPSN update 2026-02-09 11:33:21

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactiplantibacillus

Species Lactiplantibacillus modestisalitolerans

Full scientific name Lactiplantibacillus modestisalitolerans (Miyashita et al. 2015) Zheng et al. 2020

Synonyms (1)

Lactobacillus modestisalitolerans

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
125438			90
125438	positive		93.52
41631	positive	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
41631	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
41631	CIP Medium 40			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
41631	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	93.3

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
41631			Thailand	THA	Asia
41631	Fermented fish, Pla-jom	Surin, Thailand	Thailand	THA	Asia	2008-08-01

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
41631	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM540542v1 assembly for Lactiplantibacillus modestisalitolerans NBRC 107235	contig	GCA_005405425	1457219.4	2970238586	1457219	69.55

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Lactobacillus modestisalitolerans gene for 16S ribosomal RNA, partial sequence.	AB907192	1492		1457219

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Lactiplantibacillus modestisalitolerans NBRC 107235
NCBI: GCA_005405425

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	59.20	no
125439	motility	BacteriaNetⓘ	no	57.30	no
125439	gram_stain	BacteriaNetⓘ	positive	83.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	93.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus modestisalitolerans strain NBRC 107235
PATRIC: 1457219.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.52	no
125438	anaerobic	anaerobicⓘ	no	88.43	no
125438	spore-forming	spore-formingⓘ	no	83.03	no
125438	aerobic	aerobicⓘ	no	95.93	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#41631	Collection of Institut Pasteur ; Curators of the CIP; CIP 110953
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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