Strain identifier
BacDive ID: 137824
Type strain: 
Species: Aggregatibacter actinomycetemcomitans
Strain Designation: A1916
Strain history: CIP <- 1984, ATCC <- CDC: strain A1916 <- VA Hosp., Denver, USA
NCBI tax ID(s): 714 (species)
version 9 (current version)
General
@ref: 38770
BacDive-ID: 137824
keywords: 16S sequence, Bacteria
description: Aggregatibacter actinomycetemcomitans A1916 is a bacterium that was isolated from Human blood.
NCBI tax id
- NCBI tax id: 714
- Matching level: species
strain history
| @ref | history |
|---|---|
| 67770 | CCUG 37004 <-- W. Mannheim <-- R. E. Weaver; CDC A1914 <-- VA Hosp., Denver, USA. |
| 38770 | CIP <- 1984, ATCC <- CDC: strain A1916 <- VA Hosp., Denver, USA |
doi: 10.13145/bacdive137824.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Aggregatibacter
- species: Aggregatibacter actinomycetemcomitans
- full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006
synonyms
@ref synonym 20215 Bacterium actinomycetemcomitans 20215 Haemophilus actinomycetemcomitans 20215 Actinobacillus actinomycetemcomitans
@ref: 38770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Aggregatibacter
species: Aggregatibacter actinomycetemcomitans
strain designation: A1916
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 38770 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |
| 38770 | CIP Medium 10 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=10 |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 38770 | positive | growth | 37 |
| 67770 | positive | growth | 37 |
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 67770 | Human blood |
| 38770 | Human, Blood |
taxonmaps
- @ref: 69479
- File name: preview.99_801.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_18;96_321;97_406;98_465;99_801&stattab=map
- Last taxonomy: Aggregatibacter actinomycetemcomitans subclade
- 16S sequence: AB548673
- Sequence Identity:
- Total samples: 8620
- soil counts: 70
- aquatic counts: 282
- animal counts: 8180
- plant counts: 88
Safety information
risk assessment
- @ref: 38770
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Aggregatibacter actinomycetemcomitans gene for 16S ribosomal RNA, partial sequence, strin: JCM 12985 | AB548673 | 1501 | nuccore | 714 |
| 67770 | Aggregatibacter actinomycetemcomitans strain ATCC 29523 16S ribosomal RNA gene, partial sequence | AY362885 | 1362 | nuccore | 714 |
| 124043 | Aggregatibacter actinomycetemcomitans partial 16S rRNA gene, strain HG1223/ATCC29523, serovar A | FN547968 | 1199 | nuccore | 714 |
| 124043 | Aggregatibacter actinomycetemcomitans strain ATCC 29523 16S ribosomal RNA gene, partial sequence. | M75038 | 1480 | nuccore | 714 |
| 124043 | Actinobacillus actinomycetemcomitans ATCC 29523 16S rRNA gene and 16S-23S spacer, partial sequence, and tRNA-Glu gene, complete sequence. | U07776 | 260 | nuccore | 714 |
External links
@ref: 38770
culture collection no.: CIP 101033, ATCC 29523, JCM 12985, CCUG 37004, CDC A1914, MCCM 02727
straininfo link
- @ref: 94641
- straininfo: 39575
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 1885566 | 6-Deoxy-D-talan and 6-deoxy-L-talan. Novel serotype-specific polysaccharide antigens from Actinobacillus actinomycetemcomitans. | Shibuya N, Amano K, Azuma J, Nishihara T, Kitamura Y, Noguchi T, Koga T | J Biol Chem | S0021-9258(18)55299-6 | 1991 | Actinobacillus/classification/*immunology, Antigens, Bacterial/*chemistry/immunology/isolation & purification, Carbohydrate Sequence, Gas Chromatography-Mass Spectrometry, Magnetic Resonance Spectroscopy, Molecular Sequence Data, Molecular Structure, Polysaccharides/*chemistry/immunology, Polysaccharides, Bacterial/*chemistry/immunology/isolation & purification, Serotyping | Enzymology |
| Enzymology | 1965593 | [Identification and typing of Actinobacillus actinomycetemcomitans by restriction endonuclease analysis]. | Han A, Yi X, Xiao X, Zhang J, Tong Y, Xiao Z, Chen J, Li H | Hua Xi Yi Ke Da Xue Xue Bao | 1990 | Actinobacillus/classification/*isolation & purification, DNA Restriction Enzymes, DNA, Bacterial/*analysis, Peptide Fragments, Restriction Mapping, Serotyping | Phylogeny | |
| Metabolism | 1987032 | Murine macrophage interleukin-1 release by capsularlike serotype-specific polysaccharide antigens of Actinobacillus actinomycetemcomitans. | Takahashi T, Nishihara T, Ishihara Y, Amano K, Shibuya N, Moro I, Koga T | Infect Immun | 10.1128/iai.59.1.18-23.1991 | 1991 | Actinobacillus/*immunology, Animals, Antigens, Bacterial/*immunology, Interleukin-1/*metabolism, Interleukin-6/biosynthesis, Lipopolysaccharides/pharmacology, Macrophages/*metabolism, Mice, Polysaccharides, Bacterial/*immunology | |
| Pathogenicity | 2135121 | [Chemical analysis and immunochemical characterization of serotype-specific antigens from the strains of Actinobacillus actinomycetemcomitans which were frequently found in the periodontal pockets of the patients of localized juvenile periodontitis]. | Amano K | Aichi Gakuin Daigaku Shigakkai Shi | 1990 | Aggregatibacter actinomycetemcomitans/*immunology, Aggressive Periodontitis/immunology/*microbiology, Antigens, Bacterial/*chemistry/immunology, Humans, Immunodiffusion, Periodontal Pocket/*microbiology, Polysaccharides, Bacterial | ||
| Phylogeny | 2528615 | Inhibitory effects of rabbit antisera on mitogenic activity of Actinobacillus actinomycetemcomitans lipopolysaccharide. | Nishihara T, Maki E, Ishihara Y, Kato H, Noguchi T, Koga T | J Periodontal Res | 10.1111/j.1600-0765.1989.tb02001.x | 1989 | *Actinobacillus/classification, Animals, Antibodies, Bacterial/*physiology, Enzyme-Linked Immunosorbent Assay, Immune Sera/*immunology, Immunoglobulins/immunology, Immunosuppressive Agents/*physiology, Lipid A/*immunology, Lipopolysaccharides/*immunology, *Lymphocyte Activation, Mice, Mice, Inbred C3H, Mice, Inbred Strains, Rabbits, Spleen/*cytology/immunology | |
| Pathogenicity | 8708945 | Production of inflammatory mediators and cytokines by human gingival fibroblasts following bacterial challenge. | Dongari-Bagtzoglou AI, Ebersole JL | J Periodontal Res | 10.1111/j.1600-0765.1996.tb00469.x | 1996 | Aggregatibacter actinomycetemcomitans/classification/immunology/*physiology, Campylobacter/immunology/*physiology, Cells, Cultured, Cytokines/*biosynthesis, Dinoprostone/biosynthesis, Fibroblasts/immunology/*metabolism/microbiology, Gingiva/immunology/*metabolism/microbiology, Humans, Immunization, Inflammation Mediators/*metabolism, Interleukin-1/biosynthesis, Interleukin-6/biosynthesis, Interleukin-8/biosynthesis, Periodontitis/immunology/metabolism/microbiology, Periodontium/immunology, Serotyping | Metabolism |
| 9022697 | Structures of the antigenic O-polysaccharides of lipopolysaccharides produced by Actinobacillus actinomycetemcomitans serotypes a, c, d and e. | Perry MB, MacLean LM, Brisson JR, Wilson ME | Eur J Biochem | 10.1111/j.1432-1033.1996.0682r.x | 1996 | Aggregatibacter actinomycetemcomitans/*immunology, Magnetic Resonance Spectroscopy, O Antigens/*chemistry, Serotyping | ||
| Enzymology | 11548202 | Detection of antigenic surface proteins of Actinobacillus actinomycetemcomitans using the immunoblotting method. | Mineyama R | Microbios | 2001 | Actinobacillus Infections/microbiology, Aggregatibacter actinomycetemcomitans/*isolation & purification, Antibodies, Bacterial/blood/*immunology, Antigens, Bacterial/*analysis, Antigens, Surface/*analysis, *Blotting, Western/*methods, Electrophoresis, Polyacrylamide Gel, Humans, Immunoglobulin G/blood/immunology, Immunoglobulin M/blood/immunology | Pathogenicity | |
| Pathogenicity | 11881898 | Bacteriocin production by Actinobacillus actinomycetemcomitans isolated from the oral cavity of humans with periodontal disease, periodontally healthy subjects and marmosets. | Lucia LF, Farias FF, Eustaquio CJ, Auxiliadora M, Carvalho R, Alviano CS, Farias LM | Res Microbiol | 10.1016/s0923-2508(01)01285-2 | 2002 | Actinobacillus Infections/*microbiology/veterinary, Aggregatibacter actinomycetemcomitans/growth & development/*isolation & purification/metabolism, Animals, Antibiosis, Bacteriocins/*biosynthesis/pharmacology, Callithrix/microbiology, Dental Plaque/microbiology, Gram-Negative Bacteria/drug effects/growth & development, Gram-Positive Bacteria/drug effects/growth & development, Humans, Microbial Sensitivity Tests, Monkey Diseases/*microbiology, Mouth/*microbiology, Periodontal Diseases/*microbiology/veterinary | Biotechnology |
| Pathogenicity | 12066897 | Influence of abiotic factors on the bacteriocinogenic activity of Actinobacillus actinomycetemcomitans. | Lima FL, Farias FF, Carvalho MA, Alviano CS, Farias LM | Res Microbiol | 10.1016/s0923-2508(02)01318-9 | 2002 | Actinobacillus Infections/*microbiology, Aggregatibacter actinomycetemcomitans/*drug effects/*growth & development/metabolism, Anaerobiosis, *Antibiosis, Bacteriocins/biosynthesis/*pharmacology, Bacteriological Techniques/standards, Culture Media/chemistry, Humans, Hydrogen-Ion Concentration, Microbial Sensitivity Tests, Periodontal Pocket/*microbiology | Metabolism |
| Enzymology | 12704108 | Aae, an autotransporter involved in adhesion of Actinobacillus actinomycetemcomitans to epithelial cells. | Rose JE, Meyer DH, Fives-Taylor PM | Infect Immun | 10.1128/IAI.71.5.2384-2393.2003 | 2003 | Adhesins, Bacterial/genetics/*physiology, Aggregatibacter actinomycetemcomitans/*physiology, Amino Acid Sequence, *Bacterial Adhesion, Base Sequence, Cloning, Molecular, Enzyme-Linked Immunosorbent Assay, Humans, KB Cells, Lactoferrin/physiology, Microscopy, Fluorescence, Milk Proteins/pharmacology, Molecular Sequence Data, Whey Proteins | Pathogenicity |
| Phylogeny | 15152825 | Relationship of Actinobacillus actinomycetemcomitans serotype b to aggressive periodontitis: frequency in pure cultured isolates. | Yang HW, Asikainen S, Dogan B, Suda R, Lai CH | J Periodontol | 10.1902/jop.2004.75.4.592 | 2004 | Acute Disease, Adolescent, Adult, Age Factors, Aggregatibacter actinomycetemcomitans/*classification/*pathogenicity, Aggressive Periodontitis/classification/microbiology, Chronic Disease, Dental Plaque/microbiology, Female, Fluorescent Antibody Technique, Indirect, Humans, Male, Periodontitis/*classification/*microbiology, Serotyping | Pathogenicity |
| Phylogeny | 15693826 | Relationship of Actinobacillus actinomycetemcomitans serotypes to periodontal condition: prevalence and proportions in subgingival plaque. | Yang HW, Huang YF, Chan Y, Chou MY | Eur J Oral Sci | 10.1111/j.1600-0722.2004.00192.x | 2005 | Actinobacillus Infections/classification, Adolescent, Adult, Aggregatibacter actinomycetemcomitans/*classification, Chronic Disease, Colony Count, Microbial, Dental Plaque/*microbiology, Fluorescent Antibody Technique, Indirect, Humans, Periodontal Pocket/microbiology, Periodontitis/classification/*microbiology, Serotyping | Pathogenicity |
| Pathogenicity | 16490986 | The efficacy of povidone-iodine products against periodontopathic bacteria. | Nakagawa T, Hosaka Y, Ishihara K, Hiraishi T, Sato S, Ogawa T, Kamoi K | Dermatology | 10.1159/000089208 | 2006 | Aggregatibacter actinomycetemcomitans/drug effects, Anti-Infective Agents, Local/*pharmacology, Fusobacterium nucleatum/drug effects, Gram-Negative Bacteria/*drug effects, Humans, Mouth/*microbiology, Porphyromonas gingivalis/drug effects, Povidone-Iodine/*pharmacology, Prevotella intermedia/drug effects, Streptococcus anginosus/*drug effects | |
| Pathogenicity | 16809197 | Bone powder enhances the effectiveness of bioactive glass S53P4 against strains of Porphyromonas gingivalis and Actinobacillus actinomycetemcomitans in suspension. | Waltimo T, Zehnder M, Soderling E | Acta Odontol Scand | 10.1080/00016350500570700 | 2006 | Aggregatibacter actinomycetemcomitans/*drug effects/growth & development, Animals, Anti-Bacterial Agents/*pharmacology, Biocompatible Materials/chemistry/*pharmacology, *Bone and Bones, Boron Compounds/pharmacology, Cattle, Colony Count, Microbial, Decalcification Technique, Durapatite/pharmacology, *Glass/chemistry, Materials Testing, Particle Size, Porphyromonas gingivalis/*drug effects/growth & development, Powders, Silicates/pharmacology | |
| Enzymology | 18402609 | Adherence of Aggregatibacter actinomycetemcomitans via serotype-specific polysaccharide antigens in lipopolysaccharides. | Fujise O, Wang Y, Chen W, Chen C | Oral Microbiol Immunol | 10.1111/j.1399-302X.2007.00416.x | 2008 | Adhesins, Bacterial/genetics, Aggregatibacter actinomycetemcomitans/classification/genetics/*physiology, Antigens, Bacterial/genetics/*immunology, Bacterial Adhesion/genetics/*physiology, Biofilms, Blotting, Western, Electrophoresis, Polyacrylamide Gel, Gene Deletion, Glass, Humans, Integrases/genetics, Lipopolysaccharides/*immunology, Molecular Weight, Mutation/genetics, Open Reading Frames/genetics, Plasmids, Polysaccharides, Bacterial/genetics/*immunology, Serotyping | Pathogenicity |
| Pathogenicity | 19505801 | Effect of eel galectin AJL-1 on periodontopathic bacterial biofilm formation and their lipopolysaccharide-mediated inflammatory cytokine induction. | Takayama S, Saitoh E, Kimizuka R, Yamada S, Kato T | Int J Antimicrob Agents | 10.1016/j.ijantimicag.2009.04.003 | 2009 | Aggregatibacter actinomycetemcomitans/*drug effects/growth & development, Animals, Biofilms/*drug effects, Cells, Cultured, Cytokines/drug effects/*immunology, Eels, Endothelial Cells/immunology, Galectin 1/*pharmacology, Humans, Inflammation/immunology, Lipopolysaccharides/immunology/*pharmacology, Microbial Sensitivity Tests/methods, Periodontal Diseases/*microbiology, Porphyromonas gingivalis/drug effects, Prevotella intermedia/drug effects | |
| Pathogenicity | 21883229 | A novel gene required for natural competence in Aggregatibacter actinomycetemcomitans. | Tanaka A, Fujise O, Chen C, Miura M, Hamachi T, Maeda K | J Periodontal Res | 10.1111/j.1600-0765.2011.01410.x | 2011 | Aggregatibacter actinomycetemcomitans/*genetics, Bacterial Proteins/genetics, DNA Transformation Competence/*genetics, Escherichia coli/genetics, Fimbriae Proteins/genetics, Fimbriae, Bacterial/genetics, Gene Deletion, Genes, Bacterial/*genetics, Humans, Multigene Family/genetics, Open Reading Frames/genetics, Operon/genetics, Plasmids/genetics, Sequence Deletion/genetics | |
| 24159369 | Differential transcription of virulence genes in Aggregatibacter actinomycetemcomitans serotypes. | Umeda JE, Longo PL, Simionato MR, Mayer MP | J Oral Microbiol | 10.3402/jom.v5i0.21473 | 2013 | |||
| 25183268 | Antimicrobial activity against periodontopathogenic bacteria, antioxidant and cytotoxic effects of various extracts from endemic Thermopsis turcica. | Bali EB, Acik L, Akca G, Sarper M, Elci MP, Avcu F, Vural M | Asian Pac J Trop Biomed | 10.12980/APJTB.4.2014APJTB-2013-0010 | 2014 | |||
| 33711535 | Rose bengal-mediated photodynamic inactivation against periodontopathogens in vitro. | Wang D, Pan H, Yan Y, Zhang F | Photodiagnosis Photodyn Ther | 10.1016/j.pdpdt.2021.102250 | 2021 | Aggregatibacter actinomycetemcomitans, *Photochemotherapy/methods, Photosensitizing Agents/pharmacology, Porphyromonas gingivalis, *Rose Bengal/pharmacology |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 38770 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101033 | Collection of Institut Pasteur (CIP 101033) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 94641 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID39575.1 | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |