Strain identifier

BacDive ID: 133143

Type strain: Yes

Species: Chryseobacterium montanum

Strain Designation: WG4

Strain history: <- Wei Guo, Huazhong Agricultural Univ.

NCBI tax ID(s): 1849733 (species)

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General

@ref: 24912

BacDive-ID: 133143

keywords: 16S sequence, Bacteria, obligate aerobe, Gram-negative, rod-shaped, colony-forming

description: Chryseobacterium montanum WG4 is an obligate aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from soil.

NCBI tax id

  • NCBI tax id: 1849733
  • Matching level: species

strain history

  • @ref: 67771
  • history: <- Wei Guo, Huazhong Agricultural Univ.

doi: 10.13145/bacdive133143.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Weeksellaceae
  • genus: Chryseobacterium
  • species: Chryseobacterium montanum
  • full scientific name: Chryseobacterium montanum Guo et al. 2016

  • synonyms

    • @ref: 20215
    • synonym: Kaistella montana

@ref: 24912

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Chryseobacterium

species: Chryseobacterium montanum

strain designation: WG4

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotility
24912negative0.7-1.2 µm0.4-0.6 µmrod-shapedno
67771rod-shapedno
67771negative

colony morphology

  • @ref: 24912
  • colony size: 2 mm
  • colony shape: circular
  • incubation period: 3 days
  • medium used: LB agar (lysogeny broth agar)

pigmentation

  • @ref: 24912
  • production: yes
  • name: Carotenoid

Culture and growth conditions

culture medium

  • @ref: 24912
  • name: LB agar (lysogeny broth agar)
  • growth: yes

culture temp

@refgrowthtypetemperaturerange
24912positivegrowth4.0-42.0
24912positiveoptimum37mesophilic
67771positivegrowth37mesophilic

culture pH

@refabilitytypepHPH range
24912positivegrowth6.0-9.0alkaliphile
24912positiveoptimum7

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
24912obligate aerobe
67771aerobe

spore formation

@refspore formation
24912no
67771no

halophily

@refsaltgrowthtested relationconcentration
24912NaClpositivegrowth0.0-3.0 %(w/v)
24912NaCloptimum0.0-1.0 %(w/v)

observation

  • @ref: 67771
  • observation: quinones: MK-6, MK-5

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
24912168082-dehydro-D-gluconate-assimilation
24912161933-hydroxybenzoate-assimilation
24912370543-hydroxybutyrate-assimilation
24912178794-hydroxybenzoate-assimilation
24912174265-dehydro-D-gluconate-assimilation
24912casein-hydrolysis
2491262968cellulose-hydrolysis
2491262968cellulose-assimilation
2491217634D-glucose-assimilation
2491216899D-mannitol-assimilation
2491216988D-ribose-assimilation
2491217924D-sorbitol-assimilation
2491291260disodium malate-assimilation
249124853esculin-hydrolysis
2491228757fructose-builds acid from
2491228260galactose-builds acid from
249125291gelatin-hydrolysis
2491217268myo-inositol-assimilation
2491217240itaconate-assimilation
2491230849L-arabinose-builds acid from
2491230849L-arabinose-assimilation
2491216467L-arginine-assimilation
2491215971L-histidine-assimilation
2491217203L-proline-assimilation
2491262345L-rhamnose-assimilation
2491217115L-serine-assimilation
2491224996lactate-assimilation
2491229864mannitol-builds acid from
2491228053melibiose-assimilation
24912506227N-acetylglucosamine-assimilation
2491217632nitrate-reduction
2491233942ribose-builds acid from
2491217814salicin-assimilation
2491253258sodium citrate-assimilation
2491230911sorbitol-builds acid from
249129300suberic acid-assimilation
2491217992sucrose-builds acid from
2491217992sucrose-assimilation
2491227082trehalose-builds acid from
2491253423tween 40-hydrolysis
2491253425tween 60-hydrolysis
2491253426tween 80-hydrolysis
2491231011valerate-assimilation
2491218222xylose-builds acid from
2491217057cellobiose+required for growth
2491217057cellobiose+builds acid from
2491217234glucose+fermentation
2491217234glucose+builds acid from
2491228087glycogen+assimilation
2491216977L-alanine+assimilation
2491218287L-fucose+assimilation
2491217716lactose+builds acid from
2491217306maltose+builds acid from
2491217306maltose+assimilation
2491237684mannose+builds acid from
2491217272propionate+assimilation
2491217272propionate+hydrolysis
2491232954sodium acetate+assimilation
2491228017starch+hydrolysis
2491253424tween 20+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
2491216136hydrogen sulfideno
2491235581indoleyes

metabolite tests

  • @ref: 24912
  • Chebi-ID: 17234
  • metabolite: glucose
  • methylred-test: +

enzymes

@refvalueactivityec
24912acid phosphatase+3.1.3.2
24912alkaline phosphatase+3.1.3.1
24912alpha-chymotrypsin-3.4.21.1
24912alpha-fucosidase-3.2.1.51
24912alpha-galactosidase-3.2.1.22
24912alpha-glucosidase-3.2.1.20
24912alpha-mannosidase-3.2.1.24
24912beta-galactosidase-3.2.1.23
24912beta-glucosidase-3.2.1.21
24912beta-glucuronidase-3.2.1.31
24912catalase+1.11.1.6
24912cystine arylamidase-3.4.11.3
24912cytochrome oxidase+1.9.3.1
24912esterase (C 4)+
24912esterase lipase (C 8)+
24912leucine arylamidase+3.4.11.1
24912lipase (C 14)-
24912N-acetyl-beta-glucosaminidase-3.2.1.52
24912naphthol-AS-BI-phosphohydrolase+
24912trypsin-3.4.21.4
24912urease-3.5.1.5
24912valine arylamidase-

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitudeenrichment cultureenrichment culture durationenrichment culture temperature
24912soilTianmen Mountain located in Hunan province (elevation 1.5 km)Republic of ChinaCHNAsia29110LB agar plates7 days28
67771From soilpeak of Tianmen mountaint, Zhangjiajie Nature Scenic Reserve, Hunan provinceChinaCHNAsia29.0517110.481

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_23919.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_76;96_497;97_569;98_654;99_23919&stattab=map
  • Last taxonomy: Chryseobacterium montanum
  • 16S sequence: KX082815
  • Sequence Identity:
  • Total samples: 4194
  • soil counts: 723
  • aquatic counts: 1790
  • animal counts: 1620
  • plant counts: 61

Sequence information

16S sequences

  • @ref: 24912
  • description: Chryseobacterium sp. WG4(2016) 16S ribosomal RNA gene, partial sequence
  • accession: KX082815
  • length: 1478
  • database: nuccore
  • NCBI tax ID: 1849733

GC content

@refGC-contentmethod
2491237.7high performance liquid chromatography (HPLC)
6777137.7

External links

@ref: 24912

culture collection no.: KCTC 52204, CCTCC AB 2016058

literature

  • topic: Phylogeny
  • Pubmed-ID: 27412503
  • title: Chryseobacterium montanum sp. nov. isolated from mountain soil.
  • authors: Guo W, Li J, Shi M, Yuan K, Li N, Wang G
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.001309
  • year: 2016
  • mesh: Bacterial Typing Techniques, Base Composition, China, Chryseobacterium/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Phosphatidylethanolamines/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24912W. L. Guo, Jingxin,Shi, Manman,Yuan, Kai,Li, Nuohan,Wang, GejiaoChryseobacterium montanum sp. nov. isolated from mountain soil10.1099/ijsem.0.001309IJSEM 66: 4051-4056 201627412503
67771Curators of the KCTChttps://kctc.kribb.re.kr/En/Kctc
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/