Strain identifier

BacDive ID: 130391

Type strain: Yes

Species: Listeria booriae

Strain history: CIP <- 2016, DSMZ <- M. Wiedmann, Cornell Univ., Ithaca, USA: strain FSL A5-0281 <- A. Andrus

NCBI tax ID(s): 1552123 (species)

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General

@ref: 21631

BacDive-ID: 130391

DSM-Number: 28860

keywords: Bacteria, mesophilic, Gram-positive, rod-shaped

description: Listeria booriae DSM 28860 is a mesophilic, Gram-positive, rod-shaped bacterium that was isolated from non-food-contact surface in a dairy processing plant.

NCBI tax id

  • NCBI tax id: 1552123
  • Matching level: species

strain history

@refhistory
21631<- M. Wiedmann, Cornell Univ., Ithaca, USA; FSL A5-0281 <- A. Andrus
116839CIP <- 2016, DSMZ <- M. Wiedmann, Cornell Univ., Ithaca, USA: strain FSL A5-0281 <- A. Andrus

doi: 10.13145/bacdive130391.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Listeriaceae
  • genus: Listeria
  • species: Listeria booriae
  • full scientific name: Listeria booriae Weller et al. 2015

@ref: 21631

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Listeriaceae

genus: Listeria

species: Listeria booriae

full scientific name: Listeria booriae Weller et al. 2015

type strain: yes

Morphology

cell morphology

  • @ref: 116839
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 21631
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41622MEDIUM 45 - for Columbia agar with sheep bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
21631BHI MEDIUM (DSMZ Medium 215)yesName: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/215
21631COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yesName: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar basehttps://mediadive.dsmz.de/medium/693
116839CIP Medium 45yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45

culture temp

@refgrowthtypetemperaturerange
41622positivegrowth30mesophilic
21631positivegrowth30mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
683764853esculin+hydrolysis
6837618333D-arabitol+builds acid from
6837665327D-xylose+builds acid from
6837662345L-rhamnose+builds acid from
68376320061methyl alpha-D-glucopyranoside+builds acid from
6837629042glucose 1-phosphate-builds acid from
6837616443D-tagatose-builds acid from

enzymes

@refvalueactivityec
21631catalase+1.11.1.6
21631cytochrome-c oxidase-1.9.3.1
68376beta-glucosidase+3.2.1.21

API LIST

@refDIMESCalpha MANDARLXYLRHAMDGRIBG1PTAG
21631-++++++---
21631-++/-+++++/---

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
21631non-food-contact surface in a dairy processing plantNew York StateUSAUSANorth America
116839Non-food-contact surface in a dairy processing plantNew York State, USAUnited States of AmericaUSANorth America

isolation source categories

Cat1Cat2Cat3
#Engineered#Food production#Dairy product
#Engineered#Industrial#Plant (Factory)

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
216311Risk group (German classification)
1168391Risk group (French classification)

Sequence information

GC content

  • @ref: 21631
  • GC-content: 45.2
  • method: sequence analysis

External links

@ref: 21631

culture collection no.: DSM 28860, CIP 111022, LMG 28311, FSL A5-0281

straininfo link

  • @ref: 88923
  • straininfo: 394241

literature

  • topic: Phylogeny
  • Pubmed-ID: 25342111
  • title: Listeria booriae sp. nov. and Listeria newyorkensis sp. nov., from food processing environments in the USA.
  • authors: Weller D, Andrus A, Wiedmann M, den Bakker HC
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.070839-0
  • year: 2014
  • mesh: Bacterial Typing Techniques, DNA, Bacterial/genetics, Dairying, *Food Microbiology, Food-Processing Industry, Genes, Bacterial, Listeria/*classification/genetics/isolation & purification, Molecular Sequence Data, New England, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seafood, Sequence Analysis, DNA
  • topic2: Biotechnology

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21631Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28860Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28860)
41622Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/34634
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68376Automatically annotated from API LIST
88923Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID394241.1
116839Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111022Collection of Institut Pasteur (CIP 111022)