Strain identifier

BacDive ID: 11687

Type strain: Yes

Species: Actinobacillus succinogenes

Strain Designation: 130Z

Strain history: <- CCUG <- C. Bizet, CIP <- ATCC <- ?

NCBI tax ID(s): 67854 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 16239

BacDive-ID: 11687

DSM-Number: 22257

keywords: aerobe, Bacteria, 16S sequence, genome sequence, mesophilic

description: Actinobacillus succinogenes 130Z is an aerobe, mesophilic Proteobacterium that was isolated from cattle rumen.

NCBI tax id

  • NCBI tax id: 67854
  • Matching level: species

strain history: <- CCUG <- C. Bizet, CIP <- ATCC <- ?

doi: 10.13145/bacdive11687.20211221.6

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Actinobacillus
  • species: Actinobacillus succinogenes
  • full scientific name: Actinobacillus succinogenes Guettler et al. 1999

@ref: 16239

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Actinobacillus

species: Actinobacillus succinogenes

full scientific name: Actinobacillus succinogenes Guettler et al. 1999

strain designation: 130Z

type strain: yes

Morphology

colony morphology

  • @ref: 16239
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16239COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://bacmedia.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
16239BHI MEDIUM (DSMZ Medium 215)yeshttps://bacmedia.dsmz.de/medium/215Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water
41680MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)

culture temp

@refgrowthtypetemperaturerange
16239positivegrowth37mesophilic
41680positivegrowth30mesophilic
56056positivegrowth30-37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 56056
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837718257ornithine-degradation
6837717634D-glucose+builds acid from

enzymes

@refvalueactivityec
16239catalase+1.11.1.6
16239cytochrome-c oxidase+1.9.3.1
68377ornithine decarboxylase-4.1.1.17

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
16239-++++--+-+-+-
16239-++-+--++/-+-+-
16239-++++--+++-+-
16239+++++--+++-+-
16239-++++--+-+-+-
16239++++--+++-+--
16239++++--+++-+-+
16239++-+--++/-+-+--
16239++++--+-+-+--

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
16239cattle rumen
56056Cattle rumenMichiganUSAUSANorth America

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Organ#Rumen

Safety information

risk assessment

  • @ref: 16239
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Actinobacillus succinogenes strain CCUG 43843 16S ribosomal RNA gene, partial sequenceAY3628981365ena67854
16239Actinobacillus succinogenes 16S ribosomal RNA gene, complete sequenceAF0245251488ena67854

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Actinobacillus succinogenes 130Z339671.7completepatric339671
66792Actinobacillus succinogenes 130Z640753001completeimg339671

GC content

  • @ref: 16239
  • GC-content: 45.0

External links

@ref: 16239

culture collection no.: DSM 22257, ATCC 55618, CCUG 43843, CIP 106512

straininfo link

@refpassport
20218http://www.straininfo.net/strains/117188
20218http://www.straininfo.net/strains/328927
20218http://www.straininfo.net/strains/117190

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
16239Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22257)https://www.dsmz.de/collection/catalogue/details/culture/DSM-22257
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
41680Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/18651
56056Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 43843)https://www.ccug.se/strain?id=43843
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)