Strain identifier

BacDive ID: 133425

Type strain: Yes

Species: Lewinella antarctica

Strain history: <- NBRC <- <-T.-H. Choi, Department of Oceanography, Inha University, Incheon, Republic of Korea

NCBI tax ID(s): 442734 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 5

General

@ref: 28897

BacDive-ID: 133425

keywords: rod-shaped, gram-negative, aerobe, Bacteria, 16S sequence

description: Lewinella antarctica KCCM 42688 is an aerobe, gram-negative, rod-shaped bacterium that was isolated from seawater.

doi: 10.13145/bacdive133425.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidetes
  • domain: Bacteria
  • phylum: Bacteroidetes
  • class: Saprospiria
  • order: Saprospirales
  • family: Lewinellaceae
  • genus: Lewinella
  • species: Lewinella antarctica
  • full scientific name: Lewinella antarctica Oh et al. 2009

@ref: 28897

domain: Bacteria

phylum: Bacteroidetes

class: Saprospiria

order: Saprospirales

family: Lewinellaceae

genus: Lewinella

species: Lewinella antarctica

type strain: yes

Morphology

cell morphology

  • @ref: 28897
  • gram stain: negative
  • cell length: 11.8 µm
  • cell width: 1.15 µm
  • cell shape: rod-shaped
  • motility: no

pigmentation

  • @ref: 28897
  • production: yes

Culture and growth conditions

culture temp

@refgrowthtypetemperaturerange
28897positivegrowth03-25
28897positiveoptimum20psychrophilic

culture pH

@refabilitytypepH
28897positivegrowth5.0-10.0
28897positiveoptimum6

Physiology and metabolism

oxygen tolerance

  • @ref: 28897
  • oxygen tolerance: aerobe

halophily

  • @ref: 28897
  • salt: NaCl
  • growth: positive
  • tested relation: optimum
  • concentration: 3 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2889730089acetate+carbon source
2889721217L-alaninamide+carbon source
2889716449alanine+carbon source
2889740585alpha-cyclodextrin+carbon source
28897286442-oxopentanoate+carbon source
2889735391aspartate+carbon source
2889717126DL-carnitine+carbon source
2889717057cellobiose+carbon source
2889728260galactose+carbon source
2889724175galacturonate+carbon source
2889716865gamma-aminobutyric acid+carbon source
2889724265gluconate+carbon source
2889717234glucose+carbon source
2889729987glutamate+carbon source
2889728087glycogen+carbon source
2889717716lactose+carbon source
2889717306maltose+carbon source
2889729864mannitol+carbon source
2889728053melibiose+carbon source
2889728044phenylalanine+carbon source
2889751850methyl pyruvate+carbon source
2889726546rhamnose+carbon source
2889717822serine+carbon source
2889730911sorbitol+carbon source
2889730031succinate+carbon source
2889717992sucrose+carbon source
2889717748thymidine+carbon source
2889727082trehalose+carbon source
288974853esculin+hydrolysis
2889717632nitrate+reduction

enzymes

@refvalueactivityec
28897acid phosphatase+3.1.3.2
28897alkaline phosphatase+3.1.3.1
28897gelatinase+

Isolation, sampling and environmental information

isolation

  • @ref: 28897
  • sample type: seawater

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

Sequence information

16S sequences

  • @ref: 28897
  • description: Lewinella antarctica strain IMCC3223 16S ribosomal RNA gene, partial sequence
  • accession: EF554367
  • length: 1452
  • database: nuccore
  • NCBI tax ID: 442734

GC content

  • @ref: 28897
  • GC-content: 50.3

External links

@ref: 28897

culture collection no.: KCCM 42688, NBRC 103142, IMCC 3223

straininfo link

@refpassport
20218http://www.straininfo.net/strains/836691
20218http://www.straininfo.net/strains/836692

Reference

@idauthorstitledoi/urljournalpubmedID_cross_reference
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
2533710.1099/ijs.0.000794-0
28897Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-1725337