Idiomarina fontislapidosi (CIP 108573, CECT 5859, LMG 22169)

Name: Idiomarina fontislapidosi (CIP 108573, CECT 5859, LMG 22169)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 172821

Type strain

Strain Designation F23

Culture col. no. CIP 108573 CECT 5859 LMG 22169 F23

NCBI tax ID(s) 263723

Special Collections CIP

Links

Idiomarina fontislapidosi F23 is an obligate aerobe, Gram-negative, motile prokaryote that was isolated from Environment, Salty soil.

Gram-negative motile rod-shaped obligate aerobe genome sequence

Name and taxonomic classification

SI-ID 128266

LMG 22169,CECT 5859,DSM 16139,CIP 108573

@ref 20215

Last LPSN update 2025-12-16 10:11:24

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Idiomarinaceae

Genus Idiomarina

Species Idiomarina fontislapidosi

Full scientific name Idiomarina fontislapidosi Martínez-Cánovas et al. 2004

BacDive ID	Other strains from **Idiomarina fontislapidosi** (1)	Type strain
6231	I. fontislapidosi F23, DSM 16139 (type strain)

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
119422	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
119422	CIP Medium 13		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
119422	positive	growth	15-41
119422	negative	growth	5

Physiology and metabolism

Oxygen tolerance

119422

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119422	NaCl	positive	growth	2-10 %
119422	NaCl		growth	0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
119422	16947 ChEBI	citrate	-	carbon source
119422	4853 ChEBI	esculin	+	hydrolysis
119422	17234 ChEBI	glucose	-	fermentation
119422	17716 ChEBI	lactose	-	fermentation
119422	17632 ChEBI	nitrate	-	reduction
119422	17632 ChEBI	nitrate	-	respiration
119422	16301 ChEBI	nitrite	-	reduction
119422	132112 ChEBI	sodium thiosulfate	-	builds gas from

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119422	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
119422	15688 ChEBI	acetoin	-
119422	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119422	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
119422	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
119422	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119422	caseinase	-	3.4.21.50
119422	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
119422	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119422	gamma-glutamyltransferase	+	2.3.2.2
119422	gelatinase	+
119422	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
119422	lipase	-
68382	lipase (C 14)	-		from API zym
119422	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119422	ornithine decarboxylase	-	4.1.1.17
119422	oxidase	+
119422	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
119422	tryptophan deaminase	-
119422	tween esterase	+
119422	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119422	-	+	+	+	-	+	+	+	-	+	+	+	-	-	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
119422	Environment, Salty soil	Malaga	Spain	ESP	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
119422	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM322625v1 assembly for Idiomarina fontislapidosi CECT 5859	scaffold	GCA_003226255	263723.4	2770939576	263723	69.59

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Prokaryotic Diversity in Oxygen Depleted Waters of the Bay of Bengal Inferred Using Culture-Dependent and -Independent Methods.	Fernandes GL, Shenoy BD, Menezes LD, Meena RM, Damare SR.	Indian J Microbiol	10.1007/s12088-019-00786-1	2019
	Expression and characterization of a potential exopolysaccharide from a newly isolated halophilic thermotolerant bacteria Halomonas nitroreducens strain WB1.	Chikkanna A, Ghosh D, Kishore A.	PeerJ	10.7717/peerj.4684	2018
Metabolism	Characterization of the exopolysaccharide produced by Salipiger mucosus A3, a halophilic species belonging to the Alphaproteobacteria, isolated on the Spanish Mediterranean seaboard.	Llamas I, Mata JA, Tallon R, Bressollier P, Urdaci MC, Quesada E, Bejar V.	Mar Drugs	10.3390/md8082240	2010
Metabolism	The potential biotechnological applications of the exopolysaccharide produced by the halophilic bacterium Halomonas almeriensis.	Llamas I, Amjres H, Mata JA, Quesada E, Bejar V.	Molecules	10.3390/molecules17067103	2012
Phylogeny	Idiomarina fontislapidosi sp. nov. and Idiomarina ramblicola sp. nov., isolated from inland hypersaline habitats in Spain.	Martinez-Canovas MJ, Bejar V, Martinez-Checa F, Paez R, Quesada E.	Int J Syst Evol Microbiol	10.1099/ijs.0.63172-0	2004

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68382	Automatically annotated from API zym .
#119422	Collection of Institut Pasteur ; Curators of the CIP; CIP 108573
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Idiomarina fontislapidosi (CIP 108573, CECT 5859, LMG 22169)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

Isolation, sampling and environmental information

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003226255

Genome-based predictions

Literature

Literature

References

BacDive

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