Name: Psychroserpens sp. Hel_I_66
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169729

Type strain:

Species: Psychroserpens sp.

Strain Designation: Hel_I_66, Hel1_66

Culture col. no.: DSM 29409

Strain history: <- J. Harder, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; Hel1_66 <- R. Hahnke

NCBI tax ID(s): 2020870 (species)

SI-ID 402086

DSM 29409

Special Collections

DSMZ

Other strains from Psychroserpens sp.

Section

Psychroserpens sp. Hel_I_66 is a Gram-negative bacterium that was isolated from seawater sample.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Psychroserpens*
	Full Scientific Name (LPSN)	Psychroserpens Bowman et al. 1997

	Synonym	Arcticiflavibacter
	Synonym	Ichthyenterobacterium
	Synonym	Flavihalobacter

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %97.95

[Ref.: #69480]	Motility	no Confidence in %95

Multimedia content

[Ref.: #69148]

Caption:

DSM 29409, scale bar represents 2µm

[Ref.: #69148]

Intellectual property rights:

Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69148]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #69148]

Culture medium growth

[Ref.: #69148]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69148]			growth	15 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.833

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69148]	Sample type/isolated from	seawater sample
[Ref.: #69148]	Geographic location (country and/or sea, region)	Helgoland
[Ref.: #69148]	Country	Germany
[Ref.: #69148]	Country ISO 3 Code	DEU
[Ref.: #69148]	Continent	Europe
[Ref.: #69148]	Geographic location	54.1842°/7.9000°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Psychroserpens sp. Hel_I_66	GCA_000799465	contig	GenBank ENA	1250004 tax ID	*
[Ref.: #66792]	Psychroserpens sp. Hel_I_66	1250004.4	wgs	PATRIC	1250004 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Psychroserpens sp. Hel_I_66 PATRIC: 1250004.4
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.95	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	98.718	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.833	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	88.894	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	99.914	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	95	no

Availability in culture collections External links

[Ref.: #69148]

Culture collection no.

DSM 29409

[Ref.: #115897]

SI-ID 402086

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69148

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29409

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115897

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402086.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Psychroserpens sp. in external resources:
SILVA
BRENDA
PANGAEA
GBIF