Name: Bifidobacterium phasiani 6T3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169722

Type strain:

Species: Bifidobacterium phasiani

Strain Designation: 6T3

Culture col. no.: DSM 112544, LMG 32224

Strain history: <- A. Margolles Barros, Instituto de Productos Lacteos de Asturias (IPLA); GT3

NCBI tax ID(s): 2834431 (species)

SI-ID 406245

DSM 112544

Special Collections

DSMZ

Section

Bifidobacterium phasiani 6T3 is an anaerobe bacterium that was isolated from Phaisanus colchinus, feces.

anaerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Bifidobacteriales*
	Family	*Bifidobacteriaceae*
	Genus	*Bifidobacterium*
	Species	**Bifidobacterium phasiani**
	Full Scientific Name (LPSN)	Bifidobacterium phasiani Lugli et al. 2022

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Motility	no Confidence in %93

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69140]

Culture medium

BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)

[Ref.: #69140]

Culture medium growth

[Ref.: #69140]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69140]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69140]	Sample type/isolated from	Phaisanus colchinus, feces
[Ref.: #69140]	Geographic location (country and/or sea, region)	Cabo Penas, asturias
[Ref.: #69140]	Country	Spain
[Ref.: #69140]	Country ISO 3 Code	ESP
[Ref.: #69140]	Continent	Europe
[Ref.: #69140]	Geographic location	43.3854°/-5.7040°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bifidobacterium phasiani 6T3	GCA_019331775	contig	GenBank ENA	2834431 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bifidobacterium phasiani 6T3 NCBI: GCA_019331775.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	88.055	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	83.772	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	90.446	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	86.123	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.461	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	93	no

Availability in culture collections External links

[Ref.: #69140]

Culture collection no.

DSM 112544, LMG 32224

[Ref.: #115890]

SI-ID 406245

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69140

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112544

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115890

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406245.1 )

* These data were automatically processed and therefore are not curated

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