Name: Bifidobacterium phasiani 6T3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169722

Type strain:

Species: Bifidobacterium phasiani

Strain Designation: 6T3

Culture col. no.: DSM 112544, LMG 32224

Strain history: <- A. Margolles Barros, Instituto de Productos Lacteos de Asturias (IPLA); GT3

SI-ID 406245

DSM 112544

Section

Bifidobacterium phasiani 6T3 is a mesophilic bacterium that was isolated from Phaisanus colchinus, feces.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Bifidobacteriales*
	Family	*Bifidobacteriaceae*
	Genus	*Bifidobacterium*
	Species	**Bifidobacterium phasiani**
	Full Scientific Name (LPSN)	Bifidobacterium phasiani Lugli et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69140]

Culture medium

BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)

[Ref.: #69140]

Culture medium growth

[Ref.: #69140]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69140]			growth	37 °C

[Ref.: #69140]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69140]	Sample type/isolated from	Phaisanus colchinus, feces
[Ref.: #69140]	Geographic location (country and/or sea, region)	Cabo Penas, asturias
[Ref.: #69140]	Country	Spain
[Ref.: #69140]	Country ISO 3 Code	ESP
[Ref.: #69140]	Continent	Europe
[Ref.: #69140]	Geographic location	43.3854°/-5.7040°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bifidobacterium phasiani 6T3	GCA_019331775	contig	GenBank	2834431 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bifidobacterium phasiani 6T3 NCBI: GCA_019331775.1
[Ref.: #69480]	flagellated	no	97.062	no
[Ref.: #69480]	gram-positive	yes	92.214	no
[Ref.: #69480]	anaerobic	yes	96.966	no
[Ref.: #69480]	aerobic	no	95.673	no
[Ref.: #69480]	halophile	no	70.378	no
[Ref.: #69480]	spore-forming	no	94.565	no
[Ref.: #69480]	motile	no	95.022	no
[Ref.: #69480]	thermophile	no	95.957	no
[Ref.: #69480]	glucose-util	yes	86.093	no
[Ref.: #69480]	glucose-ferment	yes	79.8	no

Availability in culture collections External links

[Ref.: #69140]

Culture collection no.

DSM 112544, LMG 32224

[Ref.: #115890]

SI-ID 406245

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69140

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 112544

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115890

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406245.1 )

* These data were automatically processed and therefore are not curated

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