Name: Flavobacterium vireti THG-SM1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 168638

Type strain:

Species: Flavobacterium vireti

Strain Designation: THG-SM1

Culture col. no.: KACC 18371, CCTCC AB 2014312

NCBI tax ID(s): 1582803 (species)

Section

Flavobacterium vireti THG-SM1 is a bacterium of the family Flavobacteriaceae.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium vireti**
	Full Scientific Name (LPSN)	Flavobacterium vireti Singh et al. 2015

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence KM576853 (>99% sequence identity) for Flavobacterium from Microbeatlas

Aquatic Samples	7790
Soil Samples	5772
Animal Samples	1430
Plant Samples	1620
Total Samples	16612

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]

Biosafety level

Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Flavobacterium vireti strain THG-SM1 16S ribosomal RNA gene, partial sequence	KM576853	1427	GenBank ENA	1582803 tax ID

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KACC 18371, CCTCC AB 2014312

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium ichthyis sp. nov., isolated from a fish pond.	Chen WM, Yang CC, Sheu C, Kwon SW, Sheu SY	Int J Syst Evol Microbiol	10.1099/ijsem.0.004384	2020	*
Phylogeny	Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil.	Kim I, Kim J, Chhetri G, Seo T	J Microbiol	10.1007/s12275-019-9350-x	2019	*
Phylogeny	Flavobacterium amniphilum sp. nov., isolated from a stream.	Sheu SY, Su CL, Kwon SW, Chen WM	Int J Syst Evol Microbiol	10.1099/ijsem.0.002443	2017	*
Phylogeny	Flavobacterium inkyongense sp. nov., isolated from an artificial freshwater pond.	Park M, Joung Y, Nam GG, Kim S, Cho JC	Int J Syst Evol Microbiol	10.1099/ijsem.0.001575	2017	*
Phylogeny	Flavobacterium vireti sp. nov., isolated from soil.	Singh H, Du J, Won K, Yang JE, Akter S, Kim KY, Yi TH	Antonie Van Leeuwenhoek	10.1007/s10482-015-0437-z	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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