Name: Faecalibacterium prausnitzii NCIMB 13872
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168617

Type strain:

Species: Faecalibacterium prausnitzii

Culture col. no.: NCIMB 13872, ATCC 27768

NCBI tax ID(s): 853 (species)

SI-ID 39167

ATCC 27768, NCIMB 13872, CCUG 50206, CIP107879

Other strains from Faecalibacterium prausnitzii

F. prausnitzii APC918/95b, DSM 107838, JCM 39207
F. prausnitzii APC942/30-2, DSM 107839
F. prausnitzii APC924/119, DSM 107840, JCM 39209

Section

Faecalibacterium prausnitzii NCIMB 13872 is a bacterium of the family Oscillospiraceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Oscillospiraceae*
	Genus	*Faecalibacterium*
	Species	**Faecalibacterium prausnitzii**
	Full Scientific Name (LPSN)	Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002

	Synonym	"Faecalibacterium* moorei"*
	Synonym	Fusobacterium prausnitzii
	Synonym	"Bacteroides* praussnitzii"*

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence AJ413954 (>99% sequence identity) for Faecalibacterium prausnitzii subclade from Microbeatlas

Aquatic Samples	86
Soil Samples	28
Animal Samples	17123
Plant Samples	16
Total Samples	17253

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]

Biosafety level

Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Faecalibacterium prausnitzii 16S rRNA gene, strain ATCC 27768	AJ413954	1462	ENA	853 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Faecalibacterium prausnitzii ATCC 27768	GCA_003324185	contig	GenBank	853 tax ID	*
[Ref.: #66792]	Faecalibacterium prausnitzii strain ATCC 27768	853.450	wgs	PATRIC	853 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Faecalibacterium prausnitzii strain ATCC 27768 PATRIC: 853.450
[Ref.: #69480]	motile	no	92.459	no
[Ref.: #69480]	flagellated	no	96.529	no
[Ref.: #69480]	gram-positive	yes	86.755	no
[Ref.: #69480]	anaerobic	yes	99.693	no
[Ref.: #69480]	halophile	no	86.208	no
[Ref.: #69480]	spore-forming	no	91.1	no
[Ref.: #69480]	thermophile	no	94.404	no
[Ref.: #69480]	glucose-util	yes	89.282	no
[Ref.: #69480]	aerobic	no	98.7	no
[Ref.: #69480]	glucose-ferment	yes	80.218	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

NCIMB 13872, ATCC 27768

[Ref.: #115213]

SI-ID 39167

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Cultivation	Species-targeted sorting and cultivation of commensal bacteria from the gut microbiome using flow cytometry under anaerobic conditions.	Bellais S, Nehlich M, Ania M, Duquenoy A, Mazier W, van den Engh G, Baijer J, Treichel NS, Clavel T, Belotserkovsky I, Thomas V	Microbiome	10.1186/s40168-021-01206-7	2022	*
Phylogeny	Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces.	Zou Y, Lin X, Xue W, Tuo L, Chen MS, Chen XH, Sun CH, Li F, Liu SW, Dai Y, Kristiansen K, Xiao L	Sci Rep	10.1038/s41598-021-90786-3	2021	*
Phylogeny	On neotypes and nomina nova: commentary on "Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa", by C.B. Fitzgerald et al. (BMC Genomics (2018) 19:931).	Oren A, Garrity GM	BMC Genomics	10.1186/s12864-020-6680-3	2020	*
Phylogeny	Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa.	Fitzgerald CB, Shkoporov AN, Sutton TDS, Chaplin AV, Velayudhan V, Ross RP, Hill C	BMC Genomics	10.1186/s12864-018-5313-6	2018	*
Phylogeny	Ruthenibacterium lactatiformans gen. nov., sp. nov., an anaerobic, lactate-producing member of the family Ruminococcaceae isolated from human faeces.	Shkoporov AN, Chaplin AV, Shcherbakova VA, Suzina NE, Kafarskaia LI, Bozhenko VK, Efimov BA	Int J Syst Evol Microbiol	10.1099/ijsem.0.001143	2016	*
Phylogeny	Growth requirements and fermentation products of Fusobacterium prausnitzii, and a proposal to reclassify it as Faecalibacterium prausnitzii gen. nov., comb. nov.	Duncan SH, Hold GL, Harmsen HJM, Stewart CS, Flint HJ	Int J Syst Evol Microbiol	10.1099/00207713-52-6-2141	2002	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115213

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39167.1 )

* These data were automatically processed and therefore are not curated

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Faecalibacterium prausnitzii strain ATCC 27768

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