Name: Actinomadura violacea LCR2-06
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168414

Type strain:

Species: Actinomadura violacea

Strain Designation: LCR2-06

Culture col. no.: KCTC 49547, LMG 32136, NBRC 114810, JCM 33065, TISTR 2935

NCBI tax ID(s): 2819934 (species)

Actinomadura violacea LCR2-06 is a bacterium of the family Thermomonosporaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura violacea**
	Full Scientific Name (LPSN)	Actinomadura violacea Kanchanasin et al. 2021

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Actinomadura sp. LCR2-06 gene for 16S rRNA, partial sequence	LC554835	1409	ENA	2819934 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinomadura violacea LCR2-06	GCA_017573465	contig	GenBank	2819934 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinomadura violacea LCR2-06 NCBI: GCA_017573465.1
[Ref.: #69480]	flagellated	no	97.92	no
[Ref.: #69480]	gram-positive	yes	88.705	no
[Ref.: #69480]	anaerobic	no	98.315	no
[Ref.: #69480]	aerobic	yes	87.652	no
[Ref.: #69480]	halophile	no	92.569	no
[Ref.: #69480]	spore-forming	yes	93.6	no
[Ref.: #69480]	thermophile	no	97.786	no
[Ref.: #69480]	glucose-util	yes	88.809	no
[Ref.: #69480]	motile	no	92.01	no
[Ref.: #69480]	glucose-ferment	no	91.438	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KCTC 49547, LMG 32136, NBRC 114810, JCM 33065, TISTR 2935

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomadura violacea sp. nov., a madurastatin A1-producing strain isolated from lichen in Thailand.	Kanchanasin P, Phongsopitanun W, Yuki M, Kudo T, Ohkuma M, Nakashima T, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005126	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Actinomadura violacea in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF