Name: Leptospira abararensis 201903074
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168396

Type strain:

Species: Leptospira abararensis

Strain Designation: 201903074

Culture col. no.: CIP111914 , KIT0299

NCBI tax ID(s): 2810036 (species)

Leptospira abararensis 201903074 is a bacterium of the family Leptospiraceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Leptospirales*
	Family	*Leptospiraceae*
	Genus	*Leptospira*
	Species	**Leptospira abararensis**
	Full Scientific Name (LPSN)	Leptospira abararensis Korba et al. 2021

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Leptospira abararensis strain 201903074 16S ribosomal RNA gene, partial sequence	MZ048031	1497	ENA	2810036 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Leptospira abararensis 201903074	GCA_016918735	contig	GenBank	2810036 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Leptospira abararensis 201903074 NCBI: GCA_016918735.1
[Ref.: #69480]	flagellated	no	69.924	no
[Ref.: #69480]	gram-positive	no	97.929	no
[Ref.: #69480]	anaerobic	no	97.514	no
[Ref.: #69480]	aerobic	yes	78.648	no
[Ref.: #69480]	halophile	no	92.883	no
[Ref.: #69480]	spore-forming	no	92.357	no
[Ref.: #69480]	thermophile	no	98.027	no
[Ref.: #69480]	glucose-util	yes	61.911	no
[Ref.: #69480]	motile	yes	89.548	no
[Ref.: #69480]	glucose-ferment	no	88.559	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

CIP111914 , KIT0299

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Leptospira ainlahdjerensis sp. nov., Leptospira ainazelensis sp. nov., Leptospira abararensis sp. nov. and Leptospira chreensis sp. nov., four new species isolated from water sources in Algeria.	Korba AA, Lounici H, Kainiu M, Vincent AT, Mariet JF, Veyrier FJ, Goarant C, Picardeau M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005148	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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