Aequorivita iocasae (KCTC 82699, JCM 34635, MCCC 1K06238)

Name: Aequorivita iocasae (KCTC 82699, JCM 34635, MCCC 1K06238)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 168253

Type strain

Strain Designation KX20305

Culture col. no. KCTC 82699 JCM 34635 MCCC 1K06238 KX20305

NCBI tax ID(s) 2803865

Special Collections JCM KCTC

Links

Aequorivita iocasae KX20305 is a bacterium of the family Flavobacteriaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 286124

KCTC 82699,JCM 34635

@ref 20215

Last LPSN update 2026-05-29 08:46:20

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Aequorivita

Species Aequorivita iocasae

Full scientific name Aequorivita iocasae Zhang et al. 2022

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.856
125438		91
125439	negative	99.626

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.506

Spore formation

@ref	Spore formation	Confidence
125439		99.593
125438		91.833

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1675773v1 assembly for Aequorivita iocasae KX20305	complete	GCA_016757735	2803865.3	8002185055	2803865	91.81

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Aequorivita iocasae strain KX20305 16S ribosomal RNA gene, partial sequence	MW444847	1486		2803865

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1675773v1 assembly for Aequorivita iocasae KX20305
NCBI: GCA_016757735

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	motility	BacteriaNetⓘ	no	85.86	no
125439	gram_stain	BacteriaNetⓘ	negative	99.63	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.51	no
125439	spore_formation	BacteriaNetⓘ	no	99.59	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aequorivita iocasae KX20305
NCBI: GCA_016757735.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.86	no
125438	anaerobic	anaerobicⓘ	no	97.00	no
125438	aerobic	aerobicⓘ	yes	85.28	no
125438	spore-forming	spore-formingⓘ	no	91.83	no
125438	thermophilic	thermophileⓘ	no	96.95	no
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	MariClus: Your One-Stop Platform for Information on Marine Natural Products, Their Gene Clusters and Producing Organisms.	Hermans C, De Mol ML, Mispelaere M, De Rop AS, Rombaut J, Nusayr T, Creamer R, De Maeseneire SL, Soetaert WK, Hulpiau P.	Mar Drugs	10.3390/md21080449	2023
Phylogeny	Aequorivita iocasae sp. nov., a halophilic bacterium isolated from sediment collected at a cold seep field in the South China Sea.	Zhang H, Wang H, Cao L, Chen H, Zhong Z, Wang M, Lian C, Liu R, Zhou L, Li C	Int J Syst Evol Microbiol	10.1099/ijsem.0.005199	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Aequorivita iocasae (KCTC 82699, JCM 34635, MCCC 1K06238)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_016757735

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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