Name: Secundilactobacillus hailunensis 887-11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168155

Type strain:

Species: Secundilactobacillus hailunensis

Strain Designation: 887-11

Culture col. no.: CCTCC AB 2018396, CCM 8950, JCM 33864, NCIMB 15201

NCBI tax ID(s): 2559923 (species)

Section

Secundilactobacillus hailunensis 887-11 is a bacterium of the family Lactobacillaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Secundilactobacillus*
	Species	**Secundilactobacillus hailunensis**
	Full Scientific Name (LPSN)	Secundilactobacillus hailunensis Liu et al. 2021

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence LC473139 (>99% sequence identity) for Secundilactobacillus from Microbeatlas

Aquatic Samples	237
Soil Samples	155
Animal Samples	1277
Plant Samples	156
Total Samples	1825

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Lactobacillus sp. 887-11 gene for 16S ribosomal RNA, partial sequence	LC473139	1488	ENA	2559923 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Secundilactobacillus hailunensis 887-11	GCA_005405185	scaffold	GenBank	2559923 tax ID	*
[Ref.: #66792]	Lactobacillus sp. 887-11	2559923.3	wgs	PATRIC	2559923 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Secundilactobacillus hailunensis 887-11 NCBI: GCA_005405185.1
[Ref.: #69480]	motile	no	94.648	no
[Ref.: #69480]	flagellated	no	97.582	no
[Ref.: #69480]	gram-positive	yes	96.592	no
[Ref.: #69480]	anaerobic	no	88.628	no
[Ref.: #69480]	aerobic	no	95.572	no
[Ref.: #69480]	halophile	yes	82.042	no
[Ref.: #69480]	spore-forming	no	91.888	no
[Ref.: #69480]	glucose-util	yes	87.511	no
[Ref.: #69480]	thermophile	no	99.217	no
[Ref.: #69480]	glucose-ferment	yes	83.909	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

CCTCC AB 2018396, CCM 8950, JCM 33864, NCIMB 15201

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Apilactobacillus nanyangensis sp. nov., Secundilactobacillus hailunensis sp. nov., Secundilactobacillus yichangensis sp. nov., Levilactobacillus andaensis sp. nov., Levilactobacillus wangkuiensis sp. nov., Levilactobacillus lanxiensis sp. nov., Lacticaseibacillus mingshuiensis sp. nov. and Lacticaseibacillus suilingensis sp. nov., isolated from traditional Chinese pickle and the gut of honeybee (Apis mellifera).	Liu DD, Li YQ, Zhang LP, Ding W, Tian WL, Gu CT	Int J Syst Evol Microbiol	10.1099/ijsem.0.004898	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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