Name: Agromyces archimandritae G127ATT
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168078

Type strain:

Species: Agromyces archimandritae

Strain Designation: G127ATT, G127AT

Culture col. no.: DSM 111850, LMG 32099

Strain history: <- J. Guzman, Fraunhofer, IME branch Bioresources, Gießen; G127AT

NCBI tax ID(s): 2781962 (species)

SI-ID 400072

DSM 111850

Section

Agromyces archimandritae G127ATT is a mesophilic bacterium that was isolated from Cockroach, Archimandrita tessellata.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Agromyces*
	Species	**Agromyces archimandritae**
	Full Scientific Name (LPSN)	Agromyces archimandritae Guzman et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68643]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #68643]

Culture medium growth

[Ref.: #68643]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68643]			growth	28 °C

[Ref.: #68643]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68643]	Sample type/isolated from	Cockroach, Archimandrita tessellata
[Ref.: #68643]	Geographic location (country and/or sea, region)	Giessen
[Ref.: #68643]	Country	Germany
[Ref.: #68643]	Country ISO 3 Code	DEU
[Ref.: #68643]	Continent	Europe
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Agromyces archimandritae 16S ribosomal RNA gene, partial sequence	MW175886	1425	ENA	2781962 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Agromyces archimandritae G127AT	GCA_018024495	complete	GenBank	2781962 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Agromyces archimandritae G127AT NCBI: GCA_018024495.1
[Ref.: #69480]	flagellated	no	98.056	no
[Ref.: #69480]	gram-positive	yes	94.458	no
[Ref.: #69480]	anaerobic	no	99.281	no
[Ref.: #69480]	aerobic	yes	92.277	no
[Ref.: #69480]	halophile	no	69.855	no
[Ref.: #69480]	spore-forming	no	84.885	no
[Ref.: #69480]	thermophile	no	97.538	yes
[Ref.: #69480]	glucose-util	yes	86.1	no
[Ref.: #69480]	glucose-ferment	no	90.055	no
[Ref.: #69480]	motile	no	92.359	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

DSM 111850, LMG 32099

[Ref.: #115094]

SI-ID 400072

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Agromyces archimandritae sp. nov., isolated from the cockroach Archimandrita tessellata.	Guzman J, Ortuzar M, Poehlein A, Daniel R, Trujillo ME, Vilcinskas A	Int J Syst Evol Microbiol	10.1099/ijsem.0.005283	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68643

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111850

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115094

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400072.1 )

* These data were automatically processed and therefore are not curated

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