Actinomarinicola tropica CGMCC 1.17503 is a mesophilic prokaryote that was isolated from marine sediment.
mesophilic genome sequence 16S sequence| @ref 20215 |
Last LPSN update
2025-12-16 10:10:11 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Acidimicrobiia |
| Order Acidimicrobiales |
| Family Iamiaceae |
| Genus Actinomarinicola |
| Species Actinomarinicola tropica |
| Full scientific name Actinomarinicola tropica He et al. 2020 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 68773 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive  | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 68773 | positive | growth | 28 | mesophilic |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | + | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | - | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68369 | beta-glucosidase | + | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68369 | gelatinase | + | from API 20NE | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM965021v1 assembly for Actinomarinicola tropica SCSIO 58843 | complete | GCA_009650215   | 2664374.4  | 2989061352  | 2789776 | 95.97 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20215 | Actinomarinicola tropica 16S ribosomal RNA gene, partial sequence | MN638853 | 1395 | | 2789776 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Drought-induced microbial dynamics in cowpea rhizosphere: Exploring bacterial diversity and bioinoculant prospects. | Halo BA, Aljabri YAS, Yaish MW. | PLoS One | 10.1371/journal.pone.0320197 | 2025 | | |
| Metabolism | Diverse lifestyles and adaptive evolution of uncultured UBA5794 actinobacteria, a sister order of "Candidatus actinomarinales". | Huang J, Zheng X, Yu T, Ali M, Wiese J, Hu S, Huang L, Huang Y. | Environ Microbiome | 10.1186/s40793-025-00701-w | 2025 | |
| Constructions of quorum sensing signaling network for activated sludge microbial community. | Jin Y, Chen W, Hu J, Wang J, Ren H. | ISME Commun | 10.1093/ismeco/ycae018 | 2024 | | |
| Stalactites Core Prospect as Environmental "Microbial Ark": The Actinomycetota Diversity Paradigm, First Reported from a Greek Cave. | Vagelas I, Reizopoulou A, Exadactylos A, Madesis P, Karapetsi L, Michail G. | Pol J Microbiol | 10.33073/pjm-2023-016 | 2023 | | |
| Arctic's hidden hydrocarbon degradation microbes: investigating the effects of hydrocarbon contamination, biostimulation, and a surface washing agent on microbial communities and hydrocarbon biodegradation pathways in high-Arctic beaches. | Chen YJ, Altshuler I, Freyria NJ, Lirette A, Gongora E, Greer CW, Whyte LG. | Environ Microbiome | 10.1186/s40793-024-00626-w | 2024 | | |
| Genetics | Genomic characterisation of Actinospongicola halichondriae gen. nov., sp. nov., the first sponge-derived cultivated representative of a new genus within the class Acidimicrobiia. | Huang J, Wiese J, Steiner LX, Rahn T, Borchert E, Hentschel U. | Antonie Van Leeuwenhoek | 10.1007/s10482-025-02126-4 | 2025 | |
| Phylogeny | Actinomarinicola tropica gen. nov. sp. nov., a new marine actinobacterium of the family Iamiaceae, isolated from South China Sea sediment environments. | He YQ, Chen RW, Li C, Shi SB, Cui LQ, Long LJ, Tian XP | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004251 | 2020 | |
| Phylogeny | Rhabdothermincola sediminis gen. nov., sp. nov., a new actinobacterium isolated from hot spring sediment, and emended description of the family Iamiaceae. | Liu ZT, Jiao JY, Liu L, Li MM, Ming YZ, Song JL, Lv AP, Xian WD, Fang BZ, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004760 | 2021 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive167782.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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