Name: Roseibium limicola CAU 1637
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167474

Type strain:

Species: Roseibium limicola

Strain Designation: CAU 1637

Culture col. no.: KCTC 82429, MCCC 1K06080

NCBI tax ID(s): 2816037 (species)

Roseibium limicola CAU 1637 is a bacterium of the family Stappiaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Stappiaceae*
	Genus	*Roseibium*
	Species	**Roseibium limicola**
	Full Scientific Name (LPSN)	Roseibium limicola Weerawongwiwat et al. 2021

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Roseibium limicola strain CAU 1637 16S ribosomal RNA gene, partial sequence	MW131340	1445	ENA	2816037 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Roseibium limicola CAU 1637	GCA_017313085	scaffold	GenBank	2816037 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseibium limicola CAU 1637 NCBI: GCA_017313085.1
[Ref.: #69480]	flagellated	yes	52.655	no
[Ref.: #69480]	gram-positive	no	98.094	no
[Ref.: #69480]	anaerobic	no	97.613	no
[Ref.: #69480]	aerobic	yes	94.205	no
[Ref.: #69480]	halophile	yes	54.466	no
[Ref.: #69480]	spore-forming	no	94.667	no
[Ref.: #69480]	thermophile	no	94.55	no
[Ref.: #69480]	glucose-util	yes	94.793	no
[Ref.: #69480]	motile	yes	86.273	no
[Ref.: #69480]	glucose-ferment	no	89.625	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KCTC 82429, MCCC 1K06080

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseibium limicola sp. nov., isolated from tidal mudflat.	Weerawongwiwat V, Kim JH, Yoon JH, Suh MK, Kim HS, Lee JS, Sukhoom A, Kim W	Int J Syst Evol Microbiol	10.1099/ijsem.0.005097	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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