Paenibacillus caui (JCM 34618, CGMCC 1.18907, 81-11)

Name: Paenibacillus caui (JCM 34618, CGMCC 1.18907, 81-11)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 166955

Type strain

Strain Designation 81-11

Culture col. no. JCM 34618 CGMCC 1.18907 81-11

NCBI tax ID(s) 2873927

Special Collections JCM

Links

Paenibacillus caui 81-11 is a bacterium of the family Paenibacillaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132837

JCM 34618

@ref 20215

Last LPSN update 2026-05-29 08:46:01

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus caui

Full scientific name Paenibacillus caui Li et al. 2022

Morphology

Cell morphology

@ref	Motility	Confidence
125439		90.232

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	94.201

Spore formation

@ref	Spore formation	Confidence
125438		94.891
125439		95.102

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1990413v1 assembly for Paenibacillus caui 81-11	contig	GCA_019904135	2873927.10	8073059269	2873927	62.21

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Paenibacillus caui strain 81-11 16S ribosomal RNA gene, partial sequence	MZ994649	1382		2873927

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1990413v1 assembly for Paenibacillus caui 81-11
NCBI: GCA_019904135

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	motility	BacteriaNetⓘ	yes	90.23	no
125439	gram_stain	BacteriaNetⓘ	variable	78.31	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.20	no
125439	spore_formation	BacteriaNetⓘ	yes	95.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus caui 81-11
NCBI: GCA_019904135.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	70.59	no
125438	anaerobic	anaerobicⓘ	no	90.82	no
125438	aerobic	aerobicⓘ	no	61.71	no
125438	spore-forming	spore-formingⓘ	yes	94.89	no
125438	thermophilic	thermophileⓘ	no	89.99	no
125438	flagellated	motile2+ⓘ	yes	85.32	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus caui sp. nov., a nitrogen-fixing species isolated from the rhizosphere soil of a peach tree.	Li Q, Zuo YZ, Gao M, Chen SF	Int J Syst Evol Microbiol	10.1099/ijsem.0.005216	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Paenibacillus caui (JCM 34618, CGMCC 1.18907, 81-11)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_019904135

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media