Name: Sphingomonas piscis HDW15B
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 166671

Type strain:

Species: Sphingomonas piscis

Strain Designation: HDW15B

Culture col. no.: KCTC 72588, KACC 21341, JCM 33738

NCBI tax ID(s): 2714943 (species)

Sphingomonas piscis HDW15B is a bacterium of the family Sphingomonadaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Species	**Sphingomonas piscis**
	Full Scientific Name (LPSN)	Sphingomonas piscis Hyun et al. 2022

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Sphingomonas piscis strain HDW15B 16S ribosomal RNA gene, partial sequence	MN099416	1407	ENA	2714943 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sphingomonas piscis HDW15B	GCA_011300455	complete	GenBank	2714943 tax ID	*
[Ref.: #66792]	Sphingomonas sp. HDW15B	2714943.3	complete	PATRIC	2714943 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sphingomonas piscis HDW15B NCBI: GCA_011300455.1
[Ref.: #69480]	motile	no	86.179	no
[Ref.: #69480]	flagellated	no	96.95	no
[Ref.: #69480]	gram-positive	no	97.148	no
[Ref.: #69480]	anaerobic	no	99.083	no
[Ref.: #69480]	aerobic	yes	90.136	no
[Ref.: #69480]	halophile	no	94.052	no
[Ref.: #69480]	spore-forming	no	96.918	no
[Ref.: #69480]	thermophile	no	93.867	no
[Ref.: #69480]	glucose-util	yes	86.276	no
[Ref.: #69480]	glucose-ferment	no	88.585	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KCTC 72588, KACC 21341, JCM 33738

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish).	Hyun DW, Jeong YS, Lee JY, Sung H, Lee SY, Choi JW, Kim HS, Kim PS, Bae JW	J Microbiol	10.1007/s12275-021-1036-5	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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