Name: Companilactobacillus pabuli NFFJ11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 166598

Type strain:

Species: Companilactobacillus pabuli

Strain Designation: NFFJ11

Culture col. no.: JCM 34088, KACC 21771

NCBI tax ID(s): 2714036 (species)

Section

Companilactobacillus pabuli NFFJ11 is a bacterium of the family Lactobacillaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Companilactobacillus*
	Species	**Companilactobacillus pabuli**
	Full Scientific Name (LPSN)	Companilactobacillus pabuli Jung et al. 2021

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence MT114679 (>99% sequence identity) for Lactobacillaceae from Microbeatlas

Aquatic Samples	342
Soil Samples	237
Animal Samples	2894
Plant Samples	234
Total Samples	3707

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Companilactobacillus pabuli strain NFFJ11 16S ribosomal RNA gene, partial sequence	MT114679	1509	ENA	2714036 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Companilactobacillus pabuli NFFJ11	GCA_014058425	complete	GenBank	2714036 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Companilactobacillus pabuli NFFJ11 NCBI: GCA_014058425.1
[Ref.: #69480]	motile	no	95.366	no
[Ref.: #69480]	flagellated	no	97.508	no
[Ref.: #69480]	gram-positive	yes	94.721	no
[Ref.: #69480]	anaerobic	no	89.17	no
[Ref.: #69480]	aerobic	no	97.309	no
[Ref.: #69480]	halophile	yes	89.113	no
[Ref.: #69480]	spore-forming	no	95.74	no
[Ref.: #69480]	thermophile	no	99.603	no
[Ref.: #69480]	glucose-util	yes	90.272	no
[Ref.: #69480]	glucose-ferment	yes	88.227	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

JCM 34088, KACC 21771

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Companilactobacillus pabuli sp. nov., a lactic acid bacterium isolated from animal feed.	Jung JY, Kang HK, Jin HM, Han SS, Kwon YC, Eun JJ, Kim SC, Seo MJ, Ryu BG, Chung EJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004670	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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