Name: Lacticaseibacillus zhaodongensis JCM 33865
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164683

Type strain:

Species: Lacticaseibacillus zhaodongensis

Culture col. no.: JCM 33865, CCM 8981, CCTCC AB 2019200, LMG 31620

Strain history: C. T. Gu; Coll. Life Sci., Northeast Agric. Univ., China; 1206-1.

NCBI tax ID(s): 2668065 (species)

Section

Lacticaseibacillus zhaodongensis JCM 33865 is a mesophilic, Gram-positive bacterium that was isolated from Traditional pickle in Heilongjiang Province.

Gram-positive
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lacticaseibacillus*
	Species	**Lacticaseibacillus zhaodongensis**
	Full Scientific Name (LPSN)	Lacticaseibacillus zhaodongensis (Li et al. 2020) Liu and Gu 2020

Synonym

Lactobacillus zhaodongensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %93.012

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.964
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Traditional pickle in Heilongjiang Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus sp. 1206-1 gene for 16S ribosomal RNA, partial sequence	LC508979	1418	ENA	2668065 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lacticaseibacillus zhaodongensis 1206-1	GCA_009687905	contig	GenBank	2668065 tax ID
[Ref.: #66792]	Lactobacillus sp. 1206-1	2668065.3	wgs	PATRIC	2668065 tax ID	*

[Ref.: #67770]

GC-content

52.3 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Lactobacillus sp. 1206-1 PATRIC: 2668065.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus sp. 1206-1 PATRIC: 2668065.3
[Ref.: #69480]	motile	no	94.659	no
[Ref.: #69480]	gram-positive	yes	94.439	no
[Ref.: #69480]	anaerobic	no	93.791	no
[Ref.: #69480]	aerobic	no	97.114	no
[Ref.: #69480]	halophile	yes	89.274	no
[Ref.: #69480]	spore-forming	no	93.814	no
[Ref.: #69480]	glucose-util	yes	90.703	no
[Ref.: #69480]	thermophile	no	99.277	yes
[Ref.: #69480]	flagellated	no	97.71	no
[Ref.: #69480]	glucose-ferment	yes	88.99	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33865, CCM 8981, CCTCC AB 2019200, LMG 31620

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal of Lactobacillus kosoi Chiou et al. 2018 as a later heterotypic synonym of Lactobacillus micheneri McFrederick et al. 2018, elevation of Lactobacillus plantarum subsp. argentoratensis to the species level as Lactobacillus argentoratensis sp. nov., and Lactobacillus zhaodongensis sp. nov., isolated from traditional Chinese pickle and the intestinal tract of a honey bee (Apis mellifera).	Li TT, Liu DD, Fu ML, Gu CT	Int J Syst Evol Microbiol	10.1099/ijsem.0.004141	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Lactobacillus sp. 1206-1

Lactobacillus sp. 1206-1

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