Microcella indica (MCCC 1A16619, JCM 33842)

Name: Microcella indica (MCCC 1A16619, JCM 33842)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164679

Type strain

Culture col. no. MCCC 1A16619 JCM 33842

NCBI tax ID(s) 2750620

Special Collections JCM

History G. Zhang; Third Inst. of Oceanogr., Min. of Nat. Resour., China; CTD02-10-2.

Links

Microcella indica JCM 33842 is a bacterium that was isolated from Deep seawater from the Indian Ocean at a depth of 3,456 m.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 28238

JCM 33842

@ref 20215

Last LPSN update 2026-02-09 11:39:55

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Microbacteriaceae

Genus Microcella

Species Microcella indica

Full scientific name Microcella indica (Pei et al. 2021) Xie et al. 2023

Synonyms (2)

Chryseoglobus indicus
"Microcella indica"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Observation

67770

Observationquinones: MK-11, MK-12, MK-13 MK-14

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Latitude	Longitude
67770	Deep seawater from the Indian Ocean (44°23' E, 35°46' S) at a depth of 3,456 m	-35.7667	44.3833 -35.7667/44.3833

Taxonmaps

69479

Global distribution of 16S sequence MN463006 (>99% sequence identity) for Chryseoglobus from Microbeatlas

Aquatic Samples	1100
Soil Samples	37
Animal Samples	29
Plant Samples	9
Total Samples	1175

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1341434v1 assembly for Microcella indica CTD02-10-2	complete	GCA_013414345	2750620.3	2910219632	2750620	99.06

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Microcella indica strain CTD02-10-2 16S ribosomal RNA gene, partial sequence	MN463006	1396		2750620

GC content

@ref	GC-content (mol%)	Method
67770	69.6	genome sequence analysis

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chryseoglobus indicus sp. nov., isolated from deep sea water.	Pei S, Xie F, Wang W, Zhang S, Zhang G	Int J Syst Evol Microbiol	10.1099/ijsem.0.004564	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Microcella indica (MCCC 1A16619, JCM 33842)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_013414345

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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