Actinomyces procaprae (GDMCC 4.157, CGMCC 4.7566, JCM 33484)

Name: Actinomyces procaprae (GDMCC 4.157, CGMCC 4.7566, JCM 33484)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164581

Type strain

Culture col. no. GDMCC 4.157 CGMCC 4.7566 JCM 33484

NCBI tax ID(s) 2560010

Special Collections JCM

History JCM <-- J. Pu; China CDC, China; dk561.

Links

Actinomyces procaprae JCM 33484 is a bacterium that was isolated from Feces of Tibetan gazelle on the Qinghai Tibet plateau of PR China.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 133576

JCM 33484

@ref 20215

Last LPSN update 2026-05-29 08:45:27

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Actinomyces

Species Actinomyces procaprae

Full scientific name Actinomyces procaprae Yang et al. 2021

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	99.329
125439		96.957

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	94.778

Observation

67770

Observationquinones: MK-10

Isolation, sampling and environmental information

Isolation

67770

Sample typeFeces of Tibetan gazelle on the Qinghai Tibet plateau of PR China

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM479866v1 assembly for Actinomyces procaprae dk561	complete	GCA_004798665	2560010.3	2888022955	2560010	98.72

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Actinomyces sp. strain 561 16S ribosomal RNA gene, partial sequence	MH934916	1528		29317

GC content

@ref	GC-content (mol%)	Method
67770	69.3	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM479866v1 assembly for Actinomyces procaprae dk561
NCBI: GCA_004798665

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.78	no
125439	gram_stain	BacteriaNetⓘ	positive	99.33	no
125439	motility	BacteriaNetⓘ	no	96.96	no
125439	spore_formation	BacteriaNetⓘ	yes	55.46	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomyces marmotae sp. nov. and Actinomyces procaprae sp. nov. isolated from wild animals and reclassification of Actinomyces liubingyangii and Actinomyces tangfeifanii as Boudabousia liubingyangii comb. nov. and Boudabousia tangfeifanii comb. nov., respectively.	Yang C, Bai Y, Dong K, Yang J, Lai XH, Lu S, Zhang G, Cheng Y, Jin D, Zhang S, Lv X, Huang Y, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004696	2021
Phylogeny	Actinomyces ruminis sp. nov., an obligately anaerobic bacterium isolated from the rumen of cattle.	Lanjekar VB, Hivarkar SS, Vasudevan G, Joshi A, Dhakephalkar PK, Dagar SS	Arch Microbiol	10.1007/s00203-022-03339-1	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Actinomyces procaprae (GDMCC 4.157, CGMCC 4.7566, JCM 33484)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004798665

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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