Mycobacterium nivoides (NCCB 100660, JCM 32796)

Name: Mycobacterium nivoides (NCCB 100660, JCM 32796)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164367

Type strain

Culture col. no. NCCB 100660 JCM 32796

NCBI tax ID(s) 2487344

Special Collections JCM

History JCM <-- J. L. Dahl; Univ. of Minnesota Duluth, USA; DL90.

Links

Mycobacterium nivoides JCM 32796 is a bacterium that was isolated from Sphagnum peat bog in northern Minnesota.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 28251

JCM 32796,NCCB 100660

@ref 20215

Last LPSN update 2026-05-29 08:45:23

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Mycobacteriaceae

Genus Mycobacterium

Species Mycobacterium nivoides

Full scientific name Mycobacterium nivoides (Dahl et al. 2021) Göker et al. 2025

Synonyms (1)

Mycolicibacterium nivoides

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	92.15

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.35

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Sphagnum peat bog in northern Minnesota	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence MH290160 (>99% sequence identity) for Mycolicibacterium from Microbeatlas

Aquatic Samples	64
Soil Samples	45
Animal Samples	50
Plant Samples	337
Total Samples	496

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM385525v1 assembly for Mycolicibacterium nivoides DL90	chromosome	GCA_003855255	2487344.3	2875555210	2487344	84.93

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Mycolicibacterium nivoides strain DL90 16S ribosomal RNA gene, partial sequence	MH290160	1438		2487344

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM385525v1 assembly for Mycolicibacterium nivoides DL90
NCBI: GCA_003855255

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.35	no
125439	gram_stain	BacteriaNetⓘ	positive	92.15	no
125439	motility	BacteriaNetⓘ	no	84.51	no
125439	spore_formation	BacteriaNetⓘ	no	87.34	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	List of Recommended Names for bacteria of medical importance: report of the Ad Hoc Committee on Mitigating Changes in Prokaryotic Nomenclature.	Goker M, Christensen H, Fingerle V, Kostovski M, Margos G, Moore ERB, Oren A, Patrick S, Reischl U, Vazquez-Boland JA.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006943	2025
Phylogeny	Mycolicibacterium nivoides sp. nov isolated from a peat bog.	Dahl JL, Gatlin Iii W, Tran PM, Sheik CS	Int J Syst Evol Microbiol	10.1099/ijsem.0.004438	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mycobacterium nivoides (NCCB 100660, JCM 32796)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003855255

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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