Name: Flavonifractor sp. JCM 32521
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164283

Type strain:

Species: Flavonifractor sp.

Culture col. no.: JCM 32521

Strain history: M. Kuroda; Natl. Inst. of Infect. Dis., Japan; CCNA10.

NCBI tax ID(s): 2049025 (species)

Other strains from Flavonifractor sp.

F. sp. Sanger_08, DSM 102116
F. sp. Sanger_09, DSM 102137
F. sp. 7/1/58 FAA, DSM 24814, BEI HM-153

Section

Flavonifractor sp. JCM 32521 is an anaerobe, mesophilic, Gram-positive bacterium that was isolated from Fecal sample of a healthy Japanese adult.

Gram-positive
anaerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Oscillospiraceae*
	Genus	*Flavonifractor*
	Full Scientific Name (LPSN)	Flavonifractor Carlier et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %99.998

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %100

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.723

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Fecal sample of a healthy Japanese adult
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Clostridiales bacterium CCNA10	GCA_003573975	complete	GenBank	2109688 tax ID
[Ref.: #66792]	Clostridiales bacterium CCNA10	2109688.3	complete	PATRIC	2109688 tax ID	*

[Ref.: #67770]

GC-content

57.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Clostridiales bacterium CCNA10 PATRIC: 2109688.3
[Ref.: #69481]	spore-forming	no	88	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridiales bacterium CCNA10 PATRIC: 2109688.3
[Ref.: #69480]	motile	no	94.127	no
[Ref.: #69480]	gram-positive	yes	76.007	no
[Ref.: #69480]	anaerobic	yes	99.999	no
[Ref.: #69480]	aerobic	no	97.756	no
[Ref.: #69480]	halophile	no	89.849	no
[Ref.: #69480]	spore-forming	no	73.005	no
[Ref.: #69480]	glucose-util	yes	83.998	no
[Ref.: #69480]	flagellated	no	98.496	no
[Ref.: #69480]	thermophile	no	99.479	yes
[Ref.: #69480]	glucose-ferment	yes	64.253	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32521

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Search for species Flavonifractor sp. in external resources:
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Clostridiales bacterium CCNA10

Clostridiales bacterium CCNA10

Change proposal

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